More than 300 homologs were found in PanDaTox collection
for query gene Synpcc7942_0151 on replicon NC_007604
Organism: Synechococcus elongatus PCC 7942



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007604  Synpcc7942_0151  response regulator receiver modulated diguanylate cyclase  100 
 
 
796 aa  1586    Synechococcus elongatus PCC 7942  Bacteria  normal  0.0705209  normal 
 
 
-
 
NC_011729  PCC7424_2752  multi-component transcriptional regulator, winged helix family  30.3 
 
 
799 aa  332  2e-89  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_007413  Ava_1629  multi-component transcriptional regulator  30.82 
 
 
613 aa  251  2e-65  Anabaena variabilis ATCC 29413  Bacteria  normal  0.703021  normal  0.230726 
 
 
-
 
NC_011729  PCC7424_4548  multi-component transcriptional regulator, winged helix family  29.71 
 
 
614 aa  228  3e-58  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008009  Acid345_3505  response regulator receiver modulated diguanylate cyclase  32.32 
 
 
665 aa  226  2e-57  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_1723  multi-component transcriptional regulator, winged helix family  26.82 
 
 
597 aa  218  2.9999999999999998e-55  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.0000000000000776738 
 
 
-
 
NC_011726  PCC8801_3668  two component transcriptional regulator, winged helix family  27.36 
 
 
635 aa  206  1e-51  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_3722  two component transcriptional regulator, winged helix family  27.51 
 
 
635 aa  206  2e-51  Cyanothece sp. PCC 8802  Bacteria  normal  0.940611  normal  0.125775 
 
 
-
 
NC_013739  Cwoe_3139  response regulator receiver modulated diguanylate cyclase  31.03 
 
 
676 aa  195  3e-48  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.990746 
 
 
-
 
NC_007413  Ava_2421  response regulator receiver modulated diguanylate cyclase  34.58 
 
 
684 aa  166  2.0000000000000002e-39  Anabaena variabilis ATCC 29413  Bacteria  normal  hitchhiker  0.0000243595 
 
 
-
 
NC_011884  Cyan7425_2941  multi-component transcriptional regulator, winged helix family  34.44 
 
 
652 aa  151  5e-35  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_0841  response regulator receiver modulated diguanylate cyclase  27.63 
 
 
715 aa  140  7.999999999999999e-32  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.101081  normal 
 
 
-
 
NC_007412  Ava_C0163  multi-component transcriptional regulator  31.8 
 
 
725 aa  138  4e-31  Anabaena variabilis ATCC 29413  Bacteria  normal  0.892768  normal 
 
 
-
 
NC_009439  Pmen_0723  response regulator receiver modulated diguanylate cyclase  27.22 
 
 
540 aa  133  1.0000000000000001e-29  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_0238  multi-component transcriptional regulator  45.26 
 
 
1629 aa  129  3e-28  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_3442  response regulator receiver modulated diguanylate cyclase  27.23 
 
 
539 aa  127  8.000000000000001e-28  Marinobacter aquaeolei VT8  Bacteria  normal  0.677434  n/a   
 
 
-
 
NC_008576  Mmc1_1484  response regulator receiver modulated diguanylate cyclase  26.45 
 
 
555 aa  123  9.999999999999999e-27  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.0158649 
 
 
-
 
NC_011831  Cagg_1830  response regulator receiver modulated diguanylate cyclase  28.13 
 
 
941 aa  121  4.9999999999999996e-26  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_0065  response regulator receiver protein  32.2 
 
 
305 aa  120  7e-26  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_0623  response regulator receiver modulated diguanylate cyclase  25.86 
 
 
556 aa  119  3e-25  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.322116  normal 
 
 
-
 
NC_009656  PSPA7_5563  putative two-component response regulator  26.82 
 
 
542 aa  117  1.0000000000000001e-24  Pseudomonas aeruginosa PA7  Bacteria  normal  0.591571  n/a   
 
 
-
 
NC_008463  PA14_64050  putative two-component response regulator  26.85 
 
 
542 aa  115  5e-24  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_4315  response regulator receiver modulated diguanylate cyclase  26.54 
 
 
554 aa  112  3e-23  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.554314 
 
 
-
 
NC_011729  PCC7424_0178  response regulator receiver modulated diguanylate cyclase  27.67 
 
 
322 aa  111  4.0000000000000004e-23  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.895619 
 
 
-
 
NC_007963  Csal_2859  response regulator receiver modulated diguanylate cyclase  27.42 
 
 
532 aa  111  6e-23  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.757844  n/a   
 
 
-
 
NC_010322  PputGB1_0608  response regulator receiver modulated diguanylate cyclase  27.02 
 
 
452 aa  110  1e-22  Pseudomonas putida GB-1  Bacteria  normal  normal  0.0597995 
 
 
-
 
NC_007005  Psyr_4377  GGDEF  25.71 
 
 
551 aa  108  4e-22  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_4837  response regulator  27.97 
 
 
551 aa  108  5e-22  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.978785  n/a   
 
 
-
 
NC_002947  PP_0563  response regulator receiver modulated diguanylate cyclase  26.82 
 
 
451 aa  107  8e-22  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_4602  response regulator receiver modulated diguanylate cyclase  25 
 
 
459 aa  104  7e-21  Pseudomonas putida W619  Bacteria  normal  normal  0.195913 
 
 
-
 
NC_004347  SO_2127  response regulator  24.85 
 
 
544 aa  103  9e-21  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009512  Pput_0602  response regulator receiver modulated diguanylate cyclase  26.26 
 
 
451 aa  103  9e-21  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_013422  Hneap_1150  response regulator receiver modulated diguanylate cyclase  26.69 
 
 
547 aa  103  1e-20  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_3790  response regulator receiver modulated diguanylate cyclase  28.48 
 
 
300 aa  103  1e-20  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_1332  response regulator receiver modulated diguanylate cyclase  29.51 
 
 
306 aa  102  2e-20  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3547  diguanylate cyclase  28.47 
 
 
314 aa  103  2e-20  Rhodoferax ferrireducens T118  Bacteria  normal  0.928319  n/a   
 
 
-
 
NC_007643  Rru_A2228  response regulator receiver modulated diguanylate cyclase  28.08 
 
 
550 aa  100  9e-20  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_1723  diguanylate cyclase  27.12 
 
 
420 aa  100  9e-20  Shewanella sediminis HAW-EB3  Bacteria  normal  0.428268  hitchhiker  0.00000158997 
 
 
-
 
NC_008577  Shewana3_2212  response regulator receiver modulated diguanylate cyclase  21.96 
 
 
543 aa  100  1e-19  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_013385  Adeg_1028  two component transcriptional regulator, winged helix family  27.8 
 
 
237 aa  100  1e-19  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_1382  response regulator receiver protein  28.38 
 
 
302 aa  99.8  2e-19  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_1039  response regulator receiver modulated diguanylate cyclase  25.26 
 
 
393 aa  99.8  2e-19  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.0950507  normal  0.205042 
 
 
-
 
NC_014248  Aazo_4228  winged helix family two component transcriptional regulator  44.54 
 
 
509 aa  99.8  2e-19  'Nostoc azollae' 0708  Bacteria  normal  0.290807  n/a   
 
 
-
 
NC_013411  GYMC61_2326  response regulator receiver modulated diguanylate cyclase  27.55 
 
 
536 aa  99.4  2e-19  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_1445  two component transcriptional regulator, winged helix family  28.95 
 
 
225 aa  98.6  4e-19  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_1416  two component transcriptional regulator, winged helix family  28.95 
 
 
225 aa  98.6  4e-19  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_2087  response regulator receiver modulated diguanylate cyclase  23.29 
 
 
544 aa  98.6  4e-19  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1887  response regulator receiver modulated diguanylate cyclase  23.29 
 
 
544 aa  98.6  4e-19  Shewanella sp. MR-7  Bacteria  normal  normal  0.374169 
 
 
-
 
NC_002977  MCA1203  response regulator  28.21 
 
 
634 aa  97.8  6e-19  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_1030  response regulator receiver modulated diguanylate cyclase  27.81 
 
 
330 aa  97.8  6e-19  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.33399 
 
 
-
 
NC_010002  Daci_1192  response regulator receiver modulated diguanylate cyclase  30.92 
 
 
316 aa  97.8  7e-19  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_2309  response regulator receiver modulated diguanylate cyclase  29.19 
 
 
434 aa  97.4  9e-19  Anaeromyxobacter sp. K  Bacteria  normal  0.484645  n/a   
 
 
-
 
NC_011891  A2cp1_2397  response regulator receiver modulated diguanylate cyclase  29.19 
 
 
434 aa  97.4  9e-19  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.593336  n/a   
 
 
-
 
NC_011663  Sbal223_2104  response regulator receiver modulated diguanylate cyclase  25.62 
 
 
546 aa  97.4  9e-19  Shewanella baltica OS223  Bacteria  normal  0.0835719  normal 
 
 
-
 
NC_012918  GM21_2951  response regulator receiver modulated diguanylate cyclase  28.2 
 
 
306 aa  97.4  9e-19  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009665  Shew185_2241  response regulator receiver modulated diguanylate cyclase  25.62 
 
 
546 aa  97.4  1e-18  Shewanella baltica OS185  Bacteria  normal  0.195601  n/a   
 
 
-
 
NC_009997  Sbal195_2358  response regulator receiver modulated diguanylate cyclase  25.62 
 
 
546 aa  97.4  1e-18  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_1139  response regulator receiver modulated diguanylate cyclase  31.22 
 
 
308 aa  96.7  2e-18  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_1169  response regulator receiver modulated diguanylate cyclase  31.22 
 
 
308 aa  96.7  2e-18  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_2118  response regulator receiver modulated diguanylate cyclase  25.62 
 
 
546 aa  96.3  2e-18  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_0600  response regulator receiver protein  31.76 
 
 
301 aa  95.9  3e-18  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_2799  two component transcriptional regulator  26.64 
 
 
236 aa  95.5  3e-18  Herpetosiphon aurantiacus ATCC 23779  Bacteria  unclonable  0.000000368356  n/a   
 
 
-
 
NC_008609  Ppro_1341  response regulator receiver modulated diguanylate cyclase  28.9 
 
 
319 aa  95.5  4e-18  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_3170  response regulator receiver modulated diguanylate cyclase  28.36 
 
 
344 aa  95.1  5e-18  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.103544 
 
 
-
 
NC_009253  Dred_1554  response regulator receiver modulated diguanylate cyclase  26.91 
 
 
419 aa  94.7  5e-18  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_3851  response regulator receiver modulated diguanylate cyclase  24.84 
 
 
634 aa  94.7  6e-18  Thauera sp. MZ1T  Bacteria  normal  0.0571122  n/a   
 
 
-
 
NC_013173  Dbac_2032  response regulator receiver modulated diguanylate cyclase  30.22 
 
 
310 aa  93.2  2e-17  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_1435  two component transcriptional regulator, winged helix family  27.63 
 
 
233 aa  92.8  2e-17  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011726  PCC8801_2041  response regulator receiver modulated diguanylate cyclase  26.09 
 
 
317 aa  92.8  2e-17  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011663  Sbal223_4132  response regulator receiver modulated diguanylate cyclase  28.81 
 
 
310 aa  92.8  2e-17  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_1513  response regulator receiver modulated diguanylate cyclase  28.39 
 
 
301 aa  93.2  2e-17  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.0153071 
 
 
-
 
NC_013161  Cyan8802_2067  response regulator receiver modulated diguanylate cyclase  26.09 
 
 
317 aa  92.8  2e-17  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_2562  response regulator receiver Signal transduction histidine kinase  37.88 
 
 
437 aa  92.4  3e-17  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_007575  Suden_0218  diguanylate cyclase  29.82 
 
 
304 aa  92.4  3e-17  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_5066  response regulator receiver modulated diguanylate cyclase  25.94 
 
 
338 aa  92  3e-17  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0365  response regulator receiver modulated diguanylate cyclase  31.48 
 
 
308 aa  92.4  3e-17  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_0652  two component LuxR family transcriptional regulator  36.3 
 
 
305 aa  91.7  4e-17  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0800453  normal  0.813173 
 
 
-
 
NC_013161  Cyan8802_4261  two component transcriptional regulator, winged helix family  28.07 
 
 
224 aa  92  4e-17  Cyanothece sp. PCC 8802  Bacteria  normal  0.906422  normal  0.0109867 
 
 
-
 
NC_011884  Cyan7425_3210  response regulator receiver modulated diguanylate cyclase  28.15 
 
 
337 aa  92  4e-17  Cyanothece sp. PCC 7425  Bacteria  normal  0.32327  normal  0.712325 
 
 
-
 
NC_011729  PCC7424_4628  two component transcriptional regulator, winged helix family  28 
 
 
224 aa  92  4e-17  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.000289587 
 
 
-
 
NC_010002  Daci_1507  response regulator receiver modulated diguanylate cyclase  33.49 
 
 
308 aa  92  4e-17  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.914031 
 
 
-
 
NC_008541  Arth_2712  two component transcriptional regulator  39.66 
 
 
224 aa  91.7  4e-17  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.00552555  n/a   
 
 
-
 
NC_010581  Bind_0974  two component LuxR family transcriptional regulator  34.07 
 
 
309 aa  91.7  5e-17  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.883175  normal  0.426964 
 
 
-
 
NC_009665  Shew185_4204  response regulator receiver modulated diguanylate cyclase  30.49 
 
 
310 aa  91.7  5e-17  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU3350  sensor histidine kinase/GGDEF domain-containing protein  28.15 
 
 
565 aa  91.3  6e-17  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2812  diguanylate cyclase  25.59 
 
 
315 aa  91.3  6e-17  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_1846  response regulator receiver modulated diguanylate cyclase  28.32 
 
 
314 aa  91.3  7e-17  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_4222  two component transcriptional regulator, winged helix family  28.07 
 
 
224 aa  91.3  7e-17  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_012560  Avin_29300  Response regulator  27.78 
 
 
310 aa  90.9  8e-17  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2939  GGDEF  29.17 
 
 
318 aa  90.9  1e-16  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.417006  normal 
 
 
-
 
NC_011831  Cagg_0599  response regulator receiver modulated diguanylate cyclase  40.16 
 
 
313 aa  90.1  1e-16  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.464892  normal  0.548622 
 
 
-
 
NC_007413  Ava_4085  two component transcriptional regulator  28.83 
 
 
225 aa  90.5  1e-16  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.320847 
 
 
-
 
NC_007614  Nmul_A1860  diguanylate cyclase  28.57 
 
 
312 aa  90.1  1e-16  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3557  response regulator receiver modulated diguanylate cyclase  27.59 
 
 
322 aa  90.1  1e-16  Anaeromyxobacter sp. K  Bacteria  normal  0.457648  n/a   
 
 
-
 
NC_011886  Achl_2443  two component transcriptional regulator, winged helix family  39.66 
 
 
224 aa  90.1  1e-16  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00121019 
 
 
-
 
NC_011891  A2cp1_3625  response regulator receiver modulated diguanylate cyclase  27.59 
 
 
322 aa  90.1  1e-16  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_3614  response regulator receiver modulated diguanylate cyclase  26.8 
 
 
310 aa  90.1  1e-16  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_0591  two component LuxR family transcriptional regulator  31.54 
 
 
301 aa  89.7  2e-16  Methylobacterium sp. 4-46  Bacteria  normal  0.477799  hitchhiker  0.00469436 
 
 
-
 
NC_011729  PCC7424_5018  two component transcriptional regulator, winged helix family  27.07 
 
 
226 aa  89.7  2e-16  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_010172  Mext_3383  response regulator receiver  34.96 
 
 
300 aa  90.1  2e-16  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
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