| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_3139 |
|---|
| Symbol | |
|---|
| ID | 8733586 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | - |
|---|
| Start bp | 3347804 |
|---|
| End bp | 3349834 |
|---|
| Gene Length | 2031 bp |
|---|
| Protein Length | 676 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 646503755 |
|---|
| Product | response regulator receiver modulated diguanylate cyclase |
|---|
| Protein accession | YP_003394933 |
|---|
| Protein GI | 284044593 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.990746 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGCC CGCCGCCGCT CGAGCCGCTG CTCGCGGAGG CGTGGGCGCG CCATCGCGCG
ACGATCTTCG AACAGGTCGC AGTCGTCGAG CGCGCGGTCC TCTCCTCGAT CCGCGGCGTC
GACGACGCCC CACTGCGAGC GCAGGGCGCC GCAGAAGCGC ACAAGCTGGC GGGATCGGTC
GGGACGTTCG GCTTCGGCTC CGCGACCGGG AACGCTCACG AGCTGGAGCG GCTGCTGACG
GTGTCGCCGC CGCTCACCTC CACGGCCGCA TGGCACGCGG CGGAGCTGGT GGCGGAGCTG
CGCGAGACCC TGCAGGGGTC GCCGGCGGTC GCTGAGGCGG AGCCGCCCGA GCCGCCGCCG
CTGGTGGGCG CGCCGTCGCT GATCCTCGTG ATCGACGACG ATCGCGTGAT CGCCGACCGG
CTCGCCGCCG AGGCCGTCGC CCGCGGGCTC CGCGCGCGCA CCGCGTCATC GCCGGCAGGT
GGGCGCGCGC TCGCCCTGCT GGAGCGTCCC GACCTCGTCC TGCTGGACCT CACGTTCGCC
GACGGCACCG CGGACGCGTA CGAGCTGCTC GCCGAGCTGG CCGCCGAGCC CGACCCGGTG
CCGGTGCTCG TCCTGACAGT GCGGGACACG TTCGTCGACC GCGTCGAGGT CGCGCGGCGC
GGCGGCCGCG GCTTCGCGGC GAAGTCGCTC CCGATCCAGC AGGTCCTCGA CCACGCGGTG
CAGCTGATCG AGCGGACGCG CAGCGAGGTC GTCACGCTGC TCGCGATCGA CGATGACCGT
CTCGTGCTCG ACACCATCTC GACGCTGCTC GCTCCGCATG GCATCGAGGT CGTCGCGGTC
GACGATCCGC TGTGCGTCTG GGAGGAGCTC GAACGATCGC GGCCCGACAT CGTGATGCTC
GATGTCGACA TGCCGGGCAC GACCGGCCTC GACCTCTGCG GCGTGCTGCG CAACGACCAC
CGCTGGGCGA CGGTGCCGAT CCTGTTCCTG ACCGGGCACA GCGACGCTGC GACCATCCAT
CGCGTCTTCG CCGCCGGCGC CGATGACTAC CTGACGAAGC CGATCGTCCC CGCCGAGCTG
CTGGCGCGGA TCCGCAACCG GCTCGAACGT TTCGCGCTGC ACCGGATGCT GGCCGAGACC
GACGCGCTGA CGGGCGTCGC GAACCGCAGC AGCTCGACGC AGAAGCTCGA GCGGCTCGTG
CAGCTCGCCC ACCGCTTCGG CGAGGCGCTG ACGCTCGCGA TCATCGACCT CGACGAGTTC
AAGGCGGTCA ACGATCGCTA CGGCCACGCG CTCGGCGACG CCGTCCTGCA GCGGATGGGA
GACGTGCTGC GACAGGCCTT CCGCGGCGAG GACGTGATCG GCCGCTGGGG CGGCGAGGAG
TTCGTCGTCG GGATGTACGG CATGACGCGC GAGGACGCGC AGCAGCGGCT GCTCGACCTG
CTCGCCGAGT TCACCTCGGT GCCGTTCGCG GCGGACGACG GCGAACCGTT CACGGTCTCC
TTCAGCGCCG GCGTCGCGCA GCGCGGCGTC GACGGCGAGA GCATCACCGC GCTGCACCGC
GCCGCCGACG CCGCGCTCTA CCGCGCGAAG GAAGCCGGCC GCTCGCGCGT CCTTCCGGCT
GGCGCTGCCG CGTCCGCCGC CGCCCGCGCA CCGGACATCG TGCTGCTGGA GGCCGACGAG
CCGCTCGGCG AGATCCTGCT GAACGCGTTC GCGGCACGTG GGCACCAGAC ACGCTGGATC
CGGCATGACG ACGAAGCCCT CGACGTGCTC GCCGGAGGTT CCCCGGAGCT GCACCCGCGG
GTCGTCGTGC TCGATCTCGA TCCGGCGGCG CGAGAGGGCG CTGCGGTGCT CCAGCGGCTT
GGGACAGACG GTGTGCTGTC GTCTTCGCGG GTGGTCGTCC TGGACTCCGG TCCAGCACCG
CACGCAGGCG ACGCGGCGGA CGGGCTCTTC GCGCGCATCG CGAAACCGGT CAGCGTCCCG
TTCCTGATGC ACGAGCTGAC GCGTGCGCTG ACGACCGGCA CCGACGCGTG A
|
|---|
| Protein sequence | MSGPPPLEPL LAEAWARHRA TIFEQVAVVE RAVLSSIRGV DDAPLRAQGA AEAHKLAGSV
GTFGFGSATG NAHELERLLT VSPPLTSTAA WHAAELVAEL RETLQGSPAV AEAEPPEPPP
LVGAPSLILV IDDDRVIADR LAAEAVARGL RARTASSPAG GRALALLERP DLVLLDLTFA
DGTADAYELL AELAAEPDPV PVLVLTVRDT FVDRVEVARR GGRGFAAKSL PIQQVLDHAV
QLIERTRSEV VTLLAIDDDR LVLDTISTLL APHGIEVVAV DDPLCVWEEL ERSRPDIVML
DVDMPGTTGL DLCGVLRNDH RWATVPILFL TGHSDAATIH RVFAAGADDY LTKPIVPAEL
LARIRNRLER FALHRMLAET DALTGVANRS SSTQKLERLV QLAHRFGEAL TLAIIDLDEF
KAVNDRYGHA LGDAVLQRMG DVLRQAFRGE DVIGRWGGEE FVVGMYGMTR EDAQQRLLDL
LAEFTSVPFA ADDGEPFTVS FSAGVAQRGV DGESITALHR AADAALYRAK EAGRSRVLPA
GAAASAAARA PDIVLLEADE PLGEILLNAF AARGHQTRWI RHDDEALDVL AGGSPELHPR
VVVLDLDPAA REGAAVLQRL GTDGVLSSSR VVVLDSGPAP HAGDAADGLF ARIAKPVSVP
FLMHELTRAL TTGTDA
|
|---|
| |