Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_1039 |
Symbol | |
ID | 3671264 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 1102188 |
End bp | 1103369 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637709722 |
Product | response regulator receiver modulated diguanylate cyclase |
Protein accession | YP_314797 |
Protein GI | 74317057 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0950507 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.205042 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGCGC GCGCGATCCG CTGGGACGAA GCGCTGCCGG AGGCCGCCGG CGTCACGCCG CTCCTGCTTC TCGACATGTC GGGCTCGCCA CGACCCGAGT GGACGGCGCG CCTTCAGAAG CTGCGCCAGC GCTTTCCGAC CGGCCAGCTC ATTTGCCTCG AAGTCGGCTC CGACTTCGAC CAGTTGCAGC AGGCCCTGCG CGGCGGCTGC GACAGTTGCC TGCTCGAGGG GACGCCTTCG CACGCCATCG TCGAGCATAT CCTCGAACTG AACGAGCGGC AGGAGCAGGA AACCTTCCGC GTGCTGATCG TGGAGGACTC GAAGACCGCG AGCCACATGA TCCAGCGCAC GCTGGCCGAG AGCCAGATCG CGTCGGAGAT CGTCAACGAC CCGCGCCAGA CCTTGAACGC TCTGAAGCAG TTCAACCCCG ACCTGATCCT GATGGACATG TACATGCCGG ATTGCACCGG CGTCGAGGTC GCGCGCATCA TCCGTCAGCA CGACGAGTTT CTCGGCATGC CCATCGTCTA CCTCTCGGGC GAGACGAACG TCGCGCTGCA GGTCGACGCG ATGCGCCTCG GCGGCGATCA CTTCCTCACC AAGCCGTTCA ACCCGGTTTT CCTCAACACG ATAGTCAAGA GCAAGATCGA GCGCTATCGC GCCTTGCGCC GTTCGATGTA CCACGACAGC CTGACCGGCC TGCTCAACCA CTCAAGCGGG AAGAACACGC TCGACATGGT GTTGTCGGGA ATCGCGCATG AGGAAGGCAC GCTGTCGGTG GTCATGATCG ACATCGACCA CTTCAAGCAG ATCAACGACA GCTACGGCCA TCCGACCGGC GATCAGGTGA TCCGCAGCCT GTCGTGGCTG CTCAAGCAGC GACTGCGCAA GCACGACATC CTCTGCCGCT ACGGCGGCGA GGAGTTCCTC GTCGGGCTGC CGCACACCGA CGCGGGCCAG GCGCTCGCGA TCCTCGAGCG CGTGCGCCAG GATTTCGCGC AGATTCGCCA CCCCTATCGG GACACCCATT TCAGCGCCAG CGTCAGCGCC GGCGTCGCGA GTTATCCGCA CCAGCAGAGC GGCGACGCGC TGATCAAGGC CGCCGACGAA GCGCTCTACC AGGCCAAGCA CCGCGGCCGC AATCGCGTCC ACATCGGCAT GCCTGCACAG GCCCTGGCCT AG
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Protein sequence | MAARAIRWDE ALPEAAGVTP LLLLDMSGSP RPEWTARLQK LRQRFPTGQL ICLEVGSDFD QLQQALRGGC DSCLLEGTPS HAIVEHILEL NERQEQETFR VLIVEDSKTA SHMIQRTLAE SQIASEIVND PRQTLNALKQ FNPDLILMDM YMPDCTGVEV ARIIRQHDEF LGMPIVYLSG ETNVALQVDA MRLGGDHFLT KPFNPVFLNT IVKSKIERYR ALRRSMYHDS LTGLLNHSSG KNTLDMVLSG IAHEEGTLSV VMIDIDHFKQ INDSYGHPTG DQVIRSLSWL LKQRLRKHDI LCRYGGEEFL VGLPHTDAGQ ALAILERVRQ DFAQIRHPYR DTHFSASVSA GVASYPHQQS GDALIKAADE ALYQAKHRGR NRVHIGMPAQ ALA
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