| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2228 |
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| Symbol | |
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| ID | 3835656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 2587054 |
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| End bp | 2588706 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637826330 |
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| Product | response regulator receiver modulated diguanylate cyclase |
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| Protein accession | YP_427315 |
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| Protein GI | 83593563 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATGT TTGACTTGCA AGATCGGTTG CGCGGCGCCG TCAGCGCTTT CGTCGAGGGG
GCGATCGTCA GCGCCGAGGC CATCGCCCCC CGGCTTGATC TGTTGCGGGC CAGCGGATGG
GCCGATGAGG ACGCGGCGGC CGATGTCTCG CATTTCGTTC ACCGTCTGGC CGGCACCGCC
GGCACCTTGG GATTTGGCGA TCTCGGGCGG ACCGCCGGCG CCCTGGAAAC CCTGATCGCC
GATATCGGCG AGGTGCGACT GGCCGAGGGA GCGGCGGCCG TCGCCCCCGA TATCCTGGCC
CAGGCCGACT TGCTGGCCGA TATCATTCTC GCCGGGCTGA AGGGCGTCGC GGTCGGCGGC
TCCGATCTGC TGGCGGCGGC GATGACGCCG GCGCCGGGTT TGGCCGGCTC GCCCGACCCG
GCGGTGGTGG CGACCATCGG CGCCGGACCG GCGCTGCTCG ACATGGTGCG CGCCACTGGC
ACCACCGCCA TCGAAATCGC CTCGCCCGAC GCCTTGGAAG CCCTGTCGGT CGTCTGCCCC
GGCGGGGTGA TCGTCAATCT GGAGGCGATG GACGGCGACG ACGCGTGGCG CGGACCGCTT
GATGGTCTGC GCGCCCAGGG CGTTCCGGTT CTGGCGGTCG GCGGAACGGG CGATTTTCCC
TGGGGGCTGC GAGCCTGCCG CCTTGGCGTC GACGCCTATC TGCCCCTGGA TGATCCGGGC
GAAGTGCTTG ACCGGCTGGC GCGGATGCGC CTCACCCGCC ACGCCGAACC GCTGCGCGTG
CTGGTGCTTG ATGACGACGC GGTGTTGGCG GGGGTTTACG CGACGATCCT GGGGGCGGCC
GGTCTGGAGG CCGAGGGGAT GACCGATCCC GCCCAGATCC TGGAACGGCT GGAGGCTTTC
GAGCCCGATG TGCTGGTGAC CGATCTGCAC ATGCCCGGCT GTTCGGGCGC CGAGGTCGCC
GCCCTGGTTC GCCACCGCGC CCAATACGCC ACGATGCCGA TTATCTTCCT GTCACGGGAA
CAAGATCTGG GGCTGCAGCT TGGGGCCCTG AGCCCGGGGG CGGATTTCTT CCTGCCCAAG
CCGGTGCGGC CCGATTTCCT GGTTTCGGCG GTCCGCTCGC GGGCCCGGCG CGGGCGCGGA
TTGGCCGAGA TGATGCGGCG CGACGGGTTG AGCCGGCTGT TCACCCATTC CACCATTCTT
GACGGCCTGG AGCGCGAGGG GGCGCGGGCC GGCCGCACCG GGGCGCCGCT GTCCTTCGCC
CTGCTCGATC TCGATCACTT CAAGGCGATC AACCAGACCC ATGGCCACGC GACGGGCGAT
CAGGTGATCG TGACCCTGGC CCGGGTGATG CGGCGCGCCC TGCGTGGGTG CGACCTGCTG
GGGCGCTGCG GCGGCGAGGA ATTCGCCGTC ATCCTGCCCG GAACCCCGGC CGAGCAAGCG
GTCGGCGTCA TTGAGGATCT GCGGGCCCTG TTTCGCGGCC AAACCCTGCG AGCCCCCACC
GGCGAGGTTC GCGCCACCTT CAGCGCCGGC GTCGCCGGCA CGCCGGCCGG GGCGCCCCCC
CTATCGGCCA CGGCGCTGTT CACCGCCGCC GACAAGGCCC TGGCCGAGGC CAAGGCGCGC
GGCCGCGACC GCGTGGTGCT GGCGGAAAGC TAG
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| Protein sequence | MSMFDLQDRL RGAVSAFVEG AIVSAEAIAP RLDLLRASGW ADEDAAADVS HFVHRLAGTA
GTLGFGDLGR TAGALETLIA DIGEVRLAEG AAAVAPDILA QADLLADIIL AGLKGVAVGG
SDLLAAAMTP APGLAGSPDP AVVATIGAGP ALLDMVRATG TTAIEIASPD ALEALSVVCP
GGVIVNLEAM DGDDAWRGPL DGLRAQGVPV LAVGGTGDFP WGLRACRLGV DAYLPLDDPG
EVLDRLARMR LTRHAEPLRV LVLDDDAVLA GVYATILGAA GLEAEGMTDP AQILERLEAF
EPDVLVTDLH MPGCSGAEVA ALVRHRAQYA TMPIIFLSRE QDLGLQLGAL SPGADFFLPK
PVRPDFLVSA VRSRARRGRG LAEMMRRDGL SRLFTHSTIL DGLEREGARA GRTGAPLSFA
LLDLDHFKAI NQTHGHATGD QVIVTLARVM RRALRGCDLL GRCGGEEFAV ILPGTPAEQA
VGVIEDLRAL FRGQTLRAPT GEVRATFSAG VAGTPAGAPP LSATALFTAA DKALAEAKAR
GRDRVVLAES
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