| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2212 |
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| Symbol | |
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| ID | 4478608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 2657947 |
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| End bp | 2659578 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 639726807 |
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| Product | response regulator receiver modulated diguanylate cyclase |
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| Protein accession | YP_869847 |
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| Protein GI | 117920655 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCTTG AAGAATCCTT AGAACAATTA AAACGTCAGT ACTTGCATGC GCTACCAGAT
AAAAAGAAGC AAATCATTAC CTTATGGATA TCACTACGGA AAAACTGGCA AAGCCATATG
CTGTCGGCCG TATACCGTGA GGTGCATAAT TTAAAGGGCT CCTGTGAAAC TTTCGGCTTA
ACCGAAACCA AAGATATCGT CGATAGACTC GAATTACAGC TAAAAAACCT ACTGGACGCT
CCTGCGCCAG AACTGCCCGT CATCAAGGGG TTAGACACCC TATTCCATCA ACTGCTGCAA
AATAATCTAC GTAGTGAACC CGCAGCACCC GTGGTGGAAG CGCAAATGCA GCAAAGCCCC
TATAAGCCCA CCAAAGCACG GCATGAGTAT CGAATTGCGA TTGTGGAGGA TGACAGTAAT
GTCGGGGCGA TGATCACTAA ACAGCTGCAT GAGTTTGGTT TTAATGTGCA GCATTTTTTA
AATTTCACCG ATTTTCTGGG GATCCAAAAT ACCTCGCCCT TCGATTTAGT CTTACTCGAT
CTTATCTTGC CCGATTATAC CGAGGCCGCT TTATTTACGG CGGCGACTGA ATTTGAAAAA
AACAACACCC GCGTGTTTGT TCTCTCTTCC CGCGGCGACT TCGAGATGCG ACTGCTGGCG
ATCCGCGCCA ATGTCAGCGA GTATTTTGTC AAACCCGCCG AAACCACGCT ACTGGTACGC
AAGATCCACC AATGGCTTAA AATGTCAGAA AAACAGCCGC TCAAAATTCT GCTAGTGGAC
GATCAGCAAT CCATGGTCGA TTATTTTTCC AGCCTACTTC GCAGTCATGG CCTAATGGTA
AAAGGCATGA CCAAACCCGA ACAAGTATTG CCGACCCTTG AGCAATTTGA GCCAGACTTG
TTTATTTTTG ATTTGTATAT GCCCGATGTG AATGGTTTAG AGCTGGCAAA AATGATCCGC
CAATTAGACA AGTACAGCTC GAGTCCGATA CTCGTGCTCA GCTCCGACGA CACCATGCAG
AACAAGGTCA GCATCATTCA GGCGGGATCC GACGATTTAA TCTCAAAGCA AACCGCGCCG
AGTCTGTTTG TGACCCAAGT GATTTCCCGC GCCCAGCGTG GCCATGATAT TCGCAGCTCC
GCCAGCCGTG ATAGCTTAAC CGGGCTGCTC AATCACACTC AGATCCTGGT TGCTGCACGC
CGCTGTTATA ACCTCGCCAA ACGTATCAAC TCTTCAGTGT GCATTGCCAT GCTGGATTTA
GATCACTTTA AACAAGTAAA TGATACCTAT GGACATTCTG GCGGCGACAA AGTCCTTTTA
GCCTTTGCCC ACCTGTTGCA GCAATCTCTA CGTCCTGTGG ATTTTATGGG GCGTTACGGT
GGCGAGGAAT TTATGTTGGT CTTGCCCGAT CTACCCGCGC CCTTAGCCAT TGCCAAGCTT
AATGCCATTC GCGAGAGCTT TAGTCATATC GTATTTGTTG AAGAAGGCGC TGAATTTAAA
GTCACCCTAA GCGGTGGCTT GGCCTTCTCG ACCGAATGTA ATGAGTTTCA AGATTGTTTA
TTGCTGGCGG ATAAAAATCT GTATGAGGCG AAGCGAACTG GACGCAACCG TTTAATCACC
ACTTTAAAAT AA
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| Protein sequence | MSLEESLEQL KRQYLHALPD KKKQIITLWI SLRKNWQSHM LSAVYREVHN LKGSCETFGL
TETKDIVDRL ELQLKNLLDA PAPELPVIKG LDTLFHQLLQ NNLRSEPAAP VVEAQMQQSP
YKPTKARHEY RIAIVEDDSN VGAMITKQLH EFGFNVQHFL NFTDFLGIQN TSPFDLVLLD
LILPDYTEAA LFTAATEFEK NNTRVFVLSS RGDFEMRLLA IRANVSEYFV KPAETTLLVR
KIHQWLKMSE KQPLKILLVD DQQSMVDYFS SLLRSHGLMV KGMTKPEQVL PTLEQFEPDL
FIFDLYMPDV NGLELAKMIR QLDKYSSSPI LVLSSDDTMQ NKVSIIQAGS DDLISKQTAP
SLFVTQVISR AQRGHDIRSS ASRDSLTGLL NHTQILVAAR RCYNLAKRIN SSVCIAMLDL
DHFKQVNDTY GHSGGDKVLL AFAHLLQQSL RPVDFMGRYG GEEFMLVLPD LPAPLAIAKL
NAIRESFSHI VFVEEGAEFK VTLSGGLAFS TECNEFQDCL LLADKNLYEA KRTGRNRLIT
TLK
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