| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4377 |
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| Symbol | |
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| ID | 3369917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 5232552 |
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| End bp | 5234207 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637654737 |
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| Product | GGDEF |
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| Protein accession | YP_237445 |
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| Protein GI | 66047604 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACC ACGAAGACCC TAGCCGAGAT CGCCTGAAGC ATCACTTTGC CCAACGGGTC
ATTCACCAGG CGCGCCAGAT TCTGGAGACG TGGCAGCGTC TGCAAAAGGC CGAATGGTCG
GTCGGCGATA TGGCCGAGCT CAAGGAGTCC ACGCAGCGTC TTTCGCGCTT CGCCGAGCGT
TTCGAGCAGG CAGAACACAG CGCTCTGGCG CAGGAGATCA GCCAGGCCCT CGATGCGGTG
GAAGCCAATC GCGGTCGTCT CAACAGCCGT GTCATCACGG ATCTCAATCG TCTGATGCAG
CGCCTTTCCC GAACCGGACT GCGGCACGGC GATCGTTTCG AGCAGACGGC GCTGCCACCG
TTGCGCAAGC CCGTCTATAT AGTGCTTCAG GATCACGAGC GGGCCGAGCG CCTGGCCAAG
CAGCTGGAGT TTTTCGGGCT GGCGGCGCTG TCGCTGCACA ATGTCGCCGA GTTTCAGCGG
GCGATGGCAC AGCGGCACCC GGCAGCGATT GTCATGGATG TCGATTTCAG CGGGCCGGGC
AAGGGTCTTG AACTGGCCTC TCAGGCTCAG GAAGGGCTGG AACAGAAGCT CCCGCTGTTG
TTTTTCAGCC TCAATGAAAC CGATACGCCC ACCCGCCTGG CTGCCGTCAG GGCCGGTGGC
GAAGAGTTTC TGACCGGCGC GCTGGAAGCG TCGAGTCTGC TGGAAAAAAT TGAAGTGCTG
ACCTGCGTGG CTCAATACGA GCCTTATAAA GTGCTGATCA TCGACGATTC CCGCGCGCAG
GCGCTGCACA CCGAGCGTGT TCTCAACGCC GCCGGAATCG TCACGCGGGT GTTGCTCGAC
CCGATTCAGG CGATGTCCGA ACTGGCCGAG TTTCAGCCCG ACCTGATCAT TCTCGACATG
TACATGCCGG GGTGTACCGG TACGGAGCTG GCCAAGGTCA TTCGCCATAA CGACCGTTAT
GTCAGCGTGC CGATCATTTA TCTGTCGGCC GAAGACGATC AGGACAAGCA ACTCGATGCC
ATGAGCGAAG GCGGCGACGA TTTTCTGACC AAACCGATCA AACCCCGTCA TCTGATCACC
ACGGTGCGCA ACCGTGCTGC CAGGGCGCGA AGCCTCAAGG CACGCATGGT CCGCGACAGC
CTGACCGGGC TTTACAATCA CACGCATATT TTGCAACTGC TGGAAGATTG CAGCTTTCGT
TCGCGACGTG AGGACAAGCC GCTGTGCTTT GCCATGCTCG ATATCGACCA CTTCAAGAAG
GTCAACGACA GCCACGGCCA CCCGATGGGG GACCGCGTCA TCAAGAGCCT TGCGCTGTTT
CTCAAGCAAC GCCTGCGCAA AACCGACTTC ATCGGGCGTT ACGGCGGTGA GGAATTTGCC
ATTGTCATGC CGGACACCGA CATCCAGAGC GCCCACAGGG TGCTGGATGA CATCCGCCAT
CGCTTTGCAG AGATCCATTA CCCGGCGCAG CCCGCCGATC TGTTCTGCAC CTTCAGTGCC
GGGGTGGTTT CTCTCGGTGC CCATGACGAC AGCCTGAGCC TTGCCTCCCA GGCGGATACG
GCGTTGTACT GCGCCAAGCA CGCCGGCCGC AATCGGGTGC ATTCGGTGCT GGTCGATGTG
CCTTATCACG TCGTATTGAA CGGGATCGAA GCCTGA
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| Protein sequence | MTDHEDPSRD RLKHHFAQRV IHQARQILET WQRLQKAEWS VGDMAELKES TQRLSRFAER
FEQAEHSALA QEISQALDAV EANRGRLNSR VITDLNRLMQ RLSRTGLRHG DRFEQTALPP
LRKPVYIVLQ DHERAERLAK QLEFFGLAAL SLHNVAEFQR AMAQRHPAAI VMDVDFSGPG
KGLELASQAQ EGLEQKLPLL FFSLNETDTP TRLAAVRAGG EEFLTGALEA SSLLEKIEVL
TCVAQYEPYK VLIIDDSRAQ ALHTERVLNA AGIVTRVLLD PIQAMSELAE FQPDLIILDM
YMPGCTGTEL AKVIRHNDRY VSVPIIYLSA EDDQDKQLDA MSEGGDDFLT KPIKPRHLIT
TVRNRAARAR SLKARMVRDS LTGLYNHTHI LQLLEDCSFR SRREDKPLCF AMLDIDHFKK
VNDSHGHPMG DRVIKSLALF LKQRLRKTDF IGRYGGEEFA IVMPDTDIQS AHRVLDDIRH
RFAEIHYPAQ PADLFCTFSA GVVSLGAHDD SLSLASQADT ALYCAKHAGR NRVHSVLVDV
PYHVVLNGIE A
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