| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0238 |
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| Symbol | |
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| ID | 3683002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 300431 |
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| End bp | 305320 |
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| Gene Length | 4890 bp |
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| Protein Length | 1629 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637715566 |
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| Product | multi-component transcriptional regulator |
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| Protein accession | YP_320759 |
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| Protein GI | 75906463 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATTT TAATTGTCGA GGATGACGAG TTAAATGCTT ATGCGCTGAC AGCCGTTCTC
ACGAATCAGA ACTATGCAGT TGAAGTAGGA TCTGATGGTA TTACTGCTTG GGAATTAATC
CAAACTTACG ATTATGATTT GATTCTTTTG GATGTGATAC TACCCAGATT GGATGGGATT
AGTCTTTGTC GGCAAATACG GTCAAGTGGT CGGCAGATGC CAATTTTATT ATTAACCGGT
TGTGATAGTA GCCACGAAAA GGCGATTGGG TTAGATGCAG GTGCAGATGA TTATGTAGTT
AAACCGTTTG ATGAAGAAGA ATTAGTGGCG CGTGTACGGG CTTTGTTACG TCGGGGAGGC
ACAACAGCCC AGCCGATTCT AGAATGGGGT AATTTGCAGC TTGACCCCAG TAGTTGTGAA
GTCAGATACA ATCAAAATTT ACTATCATTA ACTCCCAAGG AATATGCACT TTTGGAGTTA
TTTCTGCGTC ACAGCCGCCG AGTGTTCAGC TGTAGCATGA TTTTAGAACA CATATGGTCT
TATGAAGACA CTCCAGGAGA AGAAGCGGTA CGCACCCATA TAAAGGGCTT GCGGATGAAG
TTGCGTAACG CGGGAGCGCC TGGTGATTTA GTAGAAACAG TCTATGGAAT TGGTTATCGC
CTCAAAGCAC AGGAAGAGGA ACAAGGAAGT AAGGACGAGG TAAAACATTC TCAGTCTACT
TCAAAAGGCA AATCTCAGCA GCAAACACTG ACTGCAATAG CTGGTATTTG GCAAAAGTTT
TATGGGCGGG TAGATGAGCA AGTCAAGGTA TTGGAACAAG CGGCGATGAC CTCTGACCGA
CCGGAAATCG TCACCCTTAC TCAAGAGACT TTAAACCCAG AATTACGCTC ACAAGCAATA
CGAGAAGCCC ACACACTAGC CGGTTCACTG GGGACTTTTG GTTTACCTGA AGGGTCGAAG
TTAGCCAGGA AAATTGAGCA ACTATTGAAA TCTGGTAAGA AATTAACGCC GACTGAGATT
CAAAGTTTGC AAAATTGGGT CAAGTTATTA AGGCAAGAGG TTGCAGCACA TGAACCGCAA
GCAGCATCAC CCGAAACAAC TTCAGCAGCT ATCCTCCAGC TACAACCTCC TCAAGCAGAA
GCAAAAGTCT TAGCAGTAGA CGACGACCCG CAAATTCTCG CCATATTGCA AACATTACTT
CATCCTTGGG GATTACAAGT AATTACCTTA GATGATCCGC GTCAATTTTG GGAAACGTTA
AGAGATGTGA ATCCAGACCT GTTAATTCTA GATGTGGAGA TGCCTTATAC CAATGGTATA
GAACTATGCC AGGTGGTGAG AAATGATCCC CAATGGAGTG AATTGCCCAT ACTCTTCCTG
ACGGTTCACA AAGATGGGGA AATTGTCAAT CAGGTATTTA GTGTTGGTGC TGACGACTTT
GTTAGTAAAC CCATCGTCGG GCCAGAGCTA GTAACGCGAA TTATCAATCG GTTAGAACGG
GTGAAATTGC TACATAAAGT AAGTGAGAGT AGGGGTATAG GGGAAAAAAA TTCTCCCCCA
TCCCCTAGCT TCACAGATTG GCGCACTATT TTCAACGCTG AACCAGAATG CGTCACCATA
GTGGCTACTG ATGGTACTTT ATTGGATATT AATCCAGCCG GTGTGGCAGC TATAGAAGCA
GATAGTGCTG GTGCAGTGAT TGGTAAGCGG GTGTATTCGT TGGTAGTTCC TGAATATCAA
CAGGTGTTTC GCCAACTCAA TGAAAGCGTT TGTCAAGGAG AACAAGGAAC ACTAGAATTT
GAAATTATCA CTTGTCGTGG TAACCGTCGT TGGATGGCGA CTCACGCTGT ACCTGTGCGA
AATGAAACAG ATGGTAATTT GGTGCAGTTG TCAATTACAC GGGATGTCAC CCAATACAAA
CAAGCAGAAC TGGAAATTAA ACGCATTAAT CGCACCTTGC AAACTTTAAG TGACTGCAAT
CAATTAGTAA TACGTACTCA AGATGAAGGT GAGTTATTGC AGAAAGTTTG CCAAATTTTA
GTGGATGTTG GTAACTATCG ATTAGCTTGG GTGGCTTTTG CAGAAAATGA TGCTGAAAAA
AGTATTCATC CAGTGGCTCA AGCTGGTTAT GAACAAGGAT ATCTGCAATC TCTCAATCTT
ACTTGGGCAG ATACAATCCG GGGTCAAGGG CCGACAGGAA CGGCAATTCG CACCGGAAAA
ACAGCCATTA TTCAAAATAT TTTGACTGAT CCTAGATTTG AAATTTGGCG CTGTCAAGCT
AGTAATCGGG GTTACGCATC GTCCATTTCT TTACCCTTAA TGAATAATGG TCAAGCTTTT
GGTGCCTTGA ACATCTACGC TGCGGAAGCG AATGCTTTTG ATAGTGATGA GGTGAAACTT
TTAGAGGAAC TGACAGCAGA TGTGGCTTAT GGCATAGTAG CATTACGCAA TCGGCGCGAT
CGCCAAATTG CCGAAGCAGC ACTACGCGAA AGTCAAGAAC GTCTGGCTTT GACCCTAGAA
GCAGTCAACT TAGGCATTTG GGACTGGAAC ATCACGACTA ACCAAATTAT CTGGTCTGAA
GGTCACGCCC GATTATTTGG CATAGAATCA GAGAAATTTG ACGGGACTTA TGAAGCCTTT
CAAGCTTGTA TCTATCCGGA AGACAGGGGA GGCTTGGCAG AGGTAATCAA TTCGGCTCGC
CAGCAAAAAA CTGACTACAG TCATGAATTT CGCATCATTT CGCCAGATGG TAATATTCAC
TGGATTGAAG GAACAGGCAA ACTCTACTAC AACGAAATGG GTGAAGCAGT GCGGATGTTG
GGTATAGTCA GAGATATTAC TTCCCGCAAG CAAATAGAAG CAACTCTGCA AAAAGTCAAT
AACGAACTGG AGTTGAGAGT AGCAGAACGA ACTGCTGAGT TAGTCAACGT CAATCGACAA
TTGCAATCAG AACTCGACGA ACGCCAGCGC GTAGAGGAAG CACTACGCAT ATCGCAAGTG
CGGCTGGCAC GCATTTTAGA CATTGCTGAT GATGCCATTA TTTCTATTAA CGGTAACCAA
CAAATCACTT TATTTAATCA AGGTGCAGAG AAAATTTTTG GCTACTCTGC CGAGGCAATT
ATCGGACAAC GCCTAGATAC ACTTATACCC CAGCGTTTCA CCCAGGCACA TCGTCAGCAC
GTAGCTGATT TTGGACAGGC TCCCAACTTG GCACGGCGTA TGGGAGAGCG GCGAGAGATA
TTTGGTCGTC GTCAAGATGG AACAGAATTC CCGGCTGAGG CTTCTATCTC CAAATTTCAA
CTAGATAAAG AGGTATTTTA TACTGTAATT TTACGTGATA TTACAGAAAG AAAACAAATT
GAACGGATGA AAGATGAGTT TGTTTCTGTT GTCAGTCATG AACTCCGCAC CCCCTTAACT
TCTATTCATG GTTCCTTAGG AATGCTAGCT AGTGGTTTAT TACCAGCCGA CTCAGAACAG
GGGAGACGTT TGTTGGAAAT TGCCACTGAT AGTACAGAAC GCCTAGTACG GTTGATTAAC
GACATATTAG ATATAGAACG TATCGAATCT GGTAGGGTGA AAATGGAGCG AGAAAGTTGC
AACCTTACCG ACTTGATTGA GTCCGCAGTT AGTATTATGC GGCCTTTAGC TAATAAAGCT
GGAGTGAAAT TATCAGTTTC CCATCCATCA ATTCAATTAT GGGTTGATCC AGACCGGATT
GTGCAGACAT TAACTAATCT GTTGAGTAAT GCGATTAAAT TTTCGACGGC GGAGAAAACA
GTATGGTTAG TAGCACAACA ATATGGCGAT GAACTATTGG TGACGGTGAA AGATAACGGA
CGCGGTATTC CCGCCGACAA ACTTGATAGT ATTTTTGAGC GGTTTCAACA GGTAGATTCT
TCCGATTCAC GCAACCATGA CGGTACTGGT TTGGGCTTAG CTATTTGCCA AAGTATTGTA
CAGCAGCATG GCGGACGCAT CTGGGCAGAA AGTGTCTTGA GCGAAGGTAG TAATTTTTAC
TTTACTTTAC CAATTTTACC AATATCCCCA AATTCAGAAC TTCCCGACTC TCTCACCCAT
TACCCCTTAT CCCCAGAGGG GGACTTACCT TCCCCAATTC CCAGTACCCA CTCCCCCCTA
GTTTTAGTTT GTGACGATGA TCCACTTATC CGCACAGAAC TACAGTCACT CTTAGAACAA
GGAGGATATC GAGTAGTCAC GGTGGCTACT GGAAAAGAAG CGATTGCCTC AGCGTCAACT
CAACATCCAG ATGTGATTGT ACTAGATTTA CTCATGCCAG GGATGAATGG TTGGGAAACA
ATGGCTATGT TGAAGGAAAG TACAGAAACC AAACATATCC CAATTGTGAT TTGCAGTGTC
TACAAACCGA CTACAAATAA CCAACCCAGT AGTGATTTTG TTGATTGGAT AAGTAAACCA
GTCCAAGAAA GCTATCTGTT ACATTCTCTC AGACAAGCAA TAGCCAAATC TTCCCGCCGA
GTCCGCATTC TTATTGTTGA AGATGATGCA GATTTAGCTG AGTTGTTTGT TACCTTGTTT
GAAAGACATG ATATTGAAAC CTTCTCAGCC AAAACCGGAC GGGAAGCCAT CCACCTCAGC
CAAGAAGTAA ATCCTGATTT ACTCATTCTT GATTTAATTT TGCCAGAAAC TGACGGATTT
GCTGTTGTAG ATTGGCTACA GAAGCACCAG CGCCTATGTA ATATCCCTGT AGTGGTTTAC
TCTGCTAAAG ACTTGGATGA ATCAGAACGT AAACGCCTCA AGCTAGGACA TACAGAATTT
TTAACCAAAG GCCGTGTCAC AACCAAAGAG TTTGAACAAC GAGTAATTGA ACTACTTCAG
CGAATTACGC CGACTAATGT TAGGGATTAG
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| Protein sequence | MKILIVEDDE LNAYALTAVL TNQNYAVEVG SDGITAWELI QTYDYDLILL DVILPRLDGI
SLCRQIRSSG RQMPILLLTG CDSSHEKAIG LDAGADDYVV KPFDEEELVA RVRALLRRGG
TTAQPILEWG NLQLDPSSCE VRYNQNLLSL TPKEYALLEL FLRHSRRVFS CSMILEHIWS
YEDTPGEEAV RTHIKGLRMK LRNAGAPGDL VETVYGIGYR LKAQEEEQGS KDEVKHSQST
SKGKSQQQTL TAIAGIWQKF YGRVDEQVKV LEQAAMTSDR PEIVTLTQET LNPELRSQAI
REAHTLAGSL GTFGLPEGSK LARKIEQLLK SGKKLTPTEI QSLQNWVKLL RQEVAAHEPQ
AASPETTSAA ILQLQPPQAE AKVLAVDDDP QILAILQTLL HPWGLQVITL DDPRQFWETL
RDVNPDLLIL DVEMPYTNGI ELCQVVRNDP QWSELPILFL TVHKDGEIVN QVFSVGADDF
VSKPIVGPEL VTRIINRLER VKLLHKVSES RGIGEKNSPP SPSFTDWRTI FNAEPECVTI
VATDGTLLDI NPAGVAAIEA DSAGAVIGKR VYSLVVPEYQ QVFRQLNESV CQGEQGTLEF
EIITCRGNRR WMATHAVPVR NETDGNLVQL SITRDVTQYK QAELEIKRIN RTLQTLSDCN
QLVIRTQDEG ELLQKVCQIL VDVGNYRLAW VAFAENDAEK SIHPVAQAGY EQGYLQSLNL
TWADTIRGQG PTGTAIRTGK TAIIQNILTD PRFEIWRCQA SNRGYASSIS LPLMNNGQAF
GALNIYAAEA NAFDSDEVKL LEELTADVAY GIVALRNRRD RQIAEAALRE SQERLALTLE
AVNLGIWDWN ITTNQIIWSE GHARLFGIES EKFDGTYEAF QACIYPEDRG GLAEVINSAR
QQKTDYSHEF RIISPDGNIH WIEGTGKLYY NEMGEAVRML GIVRDITSRK QIEATLQKVN
NELELRVAER TAELVNVNRQ LQSELDERQR VEEALRISQV RLARILDIAD DAIISINGNQ
QITLFNQGAE KIFGYSAEAI IGQRLDTLIP QRFTQAHRQH VADFGQAPNL ARRMGERREI
FGRRQDGTEF PAEASISKFQ LDKEVFYTVI LRDITERKQI ERMKDEFVSV VSHELRTPLT
SIHGSLGMLA SGLLPADSEQ GRRLLEIATD STERLVRLIN DILDIERIES GRVKMERESC
NLTDLIESAV SIMRPLANKA GVKLSVSHPS IQLWVDPDRI VQTLTNLLSN AIKFSTAEKT
VWLVAQQYGD ELLVTVKDNG RGIPADKLDS IFERFQQVDS SDSRNHDGTG LGLAICQSIV
QQHGGRIWAE SVLSEGSNFY FTLPILPISP NSELPDSLTH YPLSPEGDLP SPIPSTHSPL
VLVCDDDPLI RTELQSLLEQ GGYRVVTVAT GKEAIASAST QHPDVIVLDL LMPGMNGWET
MAMLKESTET KHIPIVICSV YKPTTNNQPS SDFVDWISKP VQESYLLHSL RQAIAKSSRR
VRILIVEDDA DLAELFVTLF ERHDIETFSA KTGREAIHLS QEVNPDLLIL DLILPETDGF
AVVDWLQKHQ RLCNIPVVVY SAKDLDESER KRLKLGHTEF LTKGRVTTKE FEQRVIELLQ
RITPTNVRD
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