Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0238 |
Symbol | |
ID | 3683002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 300431 |
End bp | 305320 |
Gene Length | 4890 bp |
Protein Length | 1629 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637715566 |
Product | multi-component transcriptional regulator |
Protein accession | YP_320759 |
Protein GI | 75906463 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATTT TAATTGTCGA GGATGACGAG TTAAATGCTT ATGCGCTGAC AGCCGTTCTC ACGAATCAGA ACTATGCAGT TGAAGTAGGA TCTGATGGTA TTACTGCTTG GGAATTAATC CAAACTTACG ATTATGATTT GATTCTTTTG GATGTGATAC TACCCAGATT GGATGGGATT AGTCTTTGTC GGCAAATACG GTCAAGTGGT CGGCAGATGC CAATTTTATT ATTAACCGGT TGTGATAGTA GCCACGAAAA GGCGATTGGG TTAGATGCAG GTGCAGATGA TTATGTAGTT AAACCGTTTG ATGAAGAAGA ATTAGTGGCG CGTGTACGGG CTTTGTTACG TCGGGGAGGC ACAACAGCCC AGCCGATTCT AGAATGGGGT AATTTGCAGC TTGACCCCAG TAGTTGTGAA GTCAGATACA ATCAAAATTT ACTATCATTA ACTCCCAAGG AATATGCACT TTTGGAGTTA TTTCTGCGTC ACAGCCGCCG AGTGTTCAGC TGTAGCATGA TTTTAGAACA CATATGGTCT TATGAAGACA CTCCAGGAGA AGAAGCGGTA CGCACCCATA TAAAGGGCTT GCGGATGAAG TTGCGTAACG CGGGAGCGCC TGGTGATTTA GTAGAAACAG TCTATGGAAT TGGTTATCGC CTCAAAGCAC AGGAAGAGGA ACAAGGAAGT AAGGACGAGG TAAAACATTC TCAGTCTACT TCAAAAGGCA AATCTCAGCA GCAAACACTG ACTGCAATAG CTGGTATTTG GCAAAAGTTT TATGGGCGGG TAGATGAGCA AGTCAAGGTA TTGGAACAAG CGGCGATGAC CTCTGACCGA CCGGAAATCG TCACCCTTAC TCAAGAGACT TTAAACCCAG AATTACGCTC ACAAGCAATA CGAGAAGCCC ACACACTAGC CGGTTCACTG GGGACTTTTG GTTTACCTGA AGGGTCGAAG TTAGCCAGGA AAATTGAGCA ACTATTGAAA TCTGGTAAGA AATTAACGCC GACTGAGATT CAAAGTTTGC AAAATTGGGT CAAGTTATTA AGGCAAGAGG TTGCAGCACA TGAACCGCAA GCAGCATCAC CCGAAACAAC TTCAGCAGCT ATCCTCCAGC TACAACCTCC TCAAGCAGAA GCAAAAGTCT TAGCAGTAGA CGACGACCCG CAAATTCTCG CCATATTGCA AACATTACTT CATCCTTGGG GATTACAAGT AATTACCTTA GATGATCCGC GTCAATTTTG GGAAACGTTA AGAGATGTGA ATCCAGACCT GTTAATTCTA GATGTGGAGA TGCCTTATAC CAATGGTATA GAACTATGCC AGGTGGTGAG AAATGATCCC CAATGGAGTG AATTGCCCAT ACTCTTCCTG ACGGTTCACA AAGATGGGGA AATTGTCAAT CAGGTATTTA GTGTTGGTGC TGACGACTTT GTTAGTAAAC CCATCGTCGG GCCAGAGCTA GTAACGCGAA TTATCAATCG GTTAGAACGG GTGAAATTGC TACATAAAGT AAGTGAGAGT AGGGGTATAG GGGAAAAAAA TTCTCCCCCA TCCCCTAGCT TCACAGATTG GCGCACTATT TTCAACGCTG AACCAGAATG CGTCACCATA GTGGCTACTG ATGGTACTTT ATTGGATATT AATCCAGCCG GTGTGGCAGC TATAGAAGCA GATAGTGCTG GTGCAGTGAT TGGTAAGCGG GTGTATTCGT TGGTAGTTCC TGAATATCAA CAGGTGTTTC GCCAACTCAA TGAAAGCGTT TGTCAAGGAG AACAAGGAAC ACTAGAATTT GAAATTATCA CTTGTCGTGG TAACCGTCGT TGGATGGCGA CTCACGCTGT ACCTGTGCGA AATGAAACAG ATGGTAATTT GGTGCAGTTG TCAATTACAC GGGATGTCAC CCAATACAAA CAAGCAGAAC TGGAAATTAA ACGCATTAAT CGCACCTTGC AAACTTTAAG TGACTGCAAT CAATTAGTAA TACGTACTCA AGATGAAGGT GAGTTATTGC AGAAAGTTTG CCAAATTTTA GTGGATGTTG GTAACTATCG ATTAGCTTGG GTGGCTTTTG CAGAAAATGA TGCTGAAAAA AGTATTCATC CAGTGGCTCA AGCTGGTTAT GAACAAGGAT ATCTGCAATC TCTCAATCTT ACTTGGGCAG ATACAATCCG GGGTCAAGGG CCGACAGGAA CGGCAATTCG CACCGGAAAA ACAGCCATTA TTCAAAATAT TTTGACTGAT CCTAGATTTG AAATTTGGCG CTGTCAAGCT AGTAATCGGG GTTACGCATC GTCCATTTCT TTACCCTTAA TGAATAATGG TCAAGCTTTT GGTGCCTTGA ACATCTACGC TGCGGAAGCG AATGCTTTTG ATAGTGATGA GGTGAAACTT TTAGAGGAAC TGACAGCAGA TGTGGCTTAT GGCATAGTAG CATTACGCAA TCGGCGCGAT CGCCAAATTG CCGAAGCAGC ACTACGCGAA AGTCAAGAAC GTCTGGCTTT GACCCTAGAA GCAGTCAACT TAGGCATTTG GGACTGGAAC ATCACGACTA ACCAAATTAT CTGGTCTGAA GGTCACGCCC GATTATTTGG CATAGAATCA GAGAAATTTG ACGGGACTTA TGAAGCCTTT CAAGCTTGTA TCTATCCGGA AGACAGGGGA GGCTTGGCAG AGGTAATCAA TTCGGCTCGC CAGCAAAAAA CTGACTACAG TCATGAATTT CGCATCATTT CGCCAGATGG TAATATTCAC TGGATTGAAG GAACAGGCAA ACTCTACTAC AACGAAATGG GTGAAGCAGT GCGGATGTTG GGTATAGTCA GAGATATTAC TTCCCGCAAG CAAATAGAAG CAACTCTGCA AAAAGTCAAT AACGAACTGG AGTTGAGAGT AGCAGAACGA ACTGCTGAGT TAGTCAACGT CAATCGACAA TTGCAATCAG AACTCGACGA ACGCCAGCGC GTAGAGGAAG CACTACGCAT ATCGCAAGTG CGGCTGGCAC GCATTTTAGA CATTGCTGAT GATGCCATTA TTTCTATTAA CGGTAACCAA CAAATCACTT TATTTAATCA AGGTGCAGAG AAAATTTTTG GCTACTCTGC CGAGGCAATT ATCGGACAAC GCCTAGATAC ACTTATACCC CAGCGTTTCA CCCAGGCACA TCGTCAGCAC GTAGCTGATT TTGGACAGGC TCCCAACTTG GCACGGCGTA TGGGAGAGCG GCGAGAGATA TTTGGTCGTC GTCAAGATGG AACAGAATTC CCGGCTGAGG CTTCTATCTC CAAATTTCAA CTAGATAAAG AGGTATTTTA TACTGTAATT TTACGTGATA TTACAGAAAG AAAACAAATT GAACGGATGA AAGATGAGTT TGTTTCTGTT GTCAGTCATG AACTCCGCAC CCCCTTAACT TCTATTCATG GTTCCTTAGG AATGCTAGCT AGTGGTTTAT TACCAGCCGA CTCAGAACAG GGGAGACGTT TGTTGGAAAT TGCCACTGAT AGTACAGAAC GCCTAGTACG GTTGATTAAC GACATATTAG ATATAGAACG TATCGAATCT GGTAGGGTGA AAATGGAGCG AGAAAGTTGC AACCTTACCG ACTTGATTGA GTCCGCAGTT AGTATTATGC GGCCTTTAGC TAATAAAGCT GGAGTGAAAT TATCAGTTTC CCATCCATCA ATTCAATTAT GGGTTGATCC AGACCGGATT GTGCAGACAT TAACTAATCT GTTGAGTAAT GCGATTAAAT TTTCGACGGC GGAGAAAACA GTATGGTTAG TAGCACAACA ATATGGCGAT GAACTATTGG TGACGGTGAA AGATAACGGA CGCGGTATTC CCGCCGACAA ACTTGATAGT ATTTTTGAGC GGTTTCAACA GGTAGATTCT TCCGATTCAC GCAACCATGA CGGTACTGGT TTGGGCTTAG CTATTTGCCA AAGTATTGTA CAGCAGCATG GCGGACGCAT CTGGGCAGAA AGTGTCTTGA GCGAAGGTAG TAATTTTTAC TTTACTTTAC CAATTTTACC AATATCCCCA AATTCAGAAC TTCCCGACTC TCTCACCCAT TACCCCTTAT CCCCAGAGGG GGACTTACCT TCCCCAATTC CCAGTACCCA CTCCCCCCTA GTTTTAGTTT GTGACGATGA TCCACTTATC CGCACAGAAC TACAGTCACT CTTAGAACAA GGAGGATATC GAGTAGTCAC GGTGGCTACT GGAAAAGAAG CGATTGCCTC AGCGTCAACT CAACATCCAG ATGTGATTGT ACTAGATTTA CTCATGCCAG GGATGAATGG TTGGGAAACA ATGGCTATGT TGAAGGAAAG TACAGAAACC AAACATATCC CAATTGTGAT TTGCAGTGTC TACAAACCGA CTACAAATAA CCAACCCAGT AGTGATTTTG TTGATTGGAT AAGTAAACCA GTCCAAGAAA GCTATCTGTT ACATTCTCTC AGACAAGCAA TAGCCAAATC TTCCCGCCGA GTCCGCATTC TTATTGTTGA AGATGATGCA GATTTAGCTG AGTTGTTTGT TACCTTGTTT GAAAGACATG ATATTGAAAC CTTCTCAGCC AAAACCGGAC GGGAAGCCAT CCACCTCAGC CAAGAAGTAA ATCCTGATTT ACTCATTCTT GATTTAATTT TGCCAGAAAC TGACGGATTT GCTGTTGTAG ATTGGCTACA GAAGCACCAG CGCCTATGTA ATATCCCTGT AGTGGTTTAC TCTGCTAAAG ACTTGGATGA ATCAGAACGT AAACGCCTCA AGCTAGGACA TACAGAATTT TTAACCAAAG GCCGTGTCAC AACCAAAGAG TTTGAACAAC GAGTAATTGA ACTACTTCAG CGAATTACGC CGACTAATGT TAGGGATTAG
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Protein sequence | MKILIVEDDE LNAYALTAVL TNQNYAVEVG SDGITAWELI QTYDYDLILL DVILPRLDGI SLCRQIRSSG RQMPILLLTG CDSSHEKAIG LDAGADDYVV KPFDEEELVA RVRALLRRGG TTAQPILEWG NLQLDPSSCE VRYNQNLLSL TPKEYALLEL FLRHSRRVFS CSMILEHIWS YEDTPGEEAV RTHIKGLRMK LRNAGAPGDL VETVYGIGYR LKAQEEEQGS KDEVKHSQST SKGKSQQQTL TAIAGIWQKF YGRVDEQVKV LEQAAMTSDR PEIVTLTQET LNPELRSQAI REAHTLAGSL GTFGLPEGSK LARKIEQLLK SGKKLTPTEI QSLQNWVKLL RQEVAAHEPQ AASPETTSAA ILQLQPPQAE AKVLAVDDDP QILAILQTLL HPWGLQVITL DDPRQFWETL RDVNPDLLIL DVEMPYTNGI ELCQVVRNDP QWSELPILFL TVHKDGEIVN QVFSVGADDF VSKPIVGPEL VTRIINRLER VKLLHKVSES RGIGEKNSPP SPSFTDWRTI FNAEPECVTI VATDGTLLDI NPAGVAAIEA DSAGAVIGKR VYSLVVPEYQ QVFRQLNESV CQGEQGTLEF EIITCRGNRR WMATHAVPVR NETDGNLVQL SITRDVTQYK QAELEIKRIN RTLQTLSDCN QLVIRTQDEG ELLQKVCQIL VDVGNYRLAW VAFAENDAEK SIHPVAQAGY EQGYLQSLNL TWADTIRGQG PTGTAIRTGK TAIIQNILTD PRFEIWRCQA SNRGYASSIS LPLMNNGQAF GALNIYAAEA NAFDSDEVKL LEELTADVAY GIVALRNRRD RQIAEAALRE SQERLALTLE AVNLGIWDWN ITTNQIIWSE GHARLFGIES EKFDGTYEAF QACIYPEDRG GLAEVINSAR QQKTDYSHEF RIISPDGNIH WIEGTGKLYY NEMGEAVRML GIVRDITSRK QIEATLQKVN NELELRVAER TAELVNVNRQ LQSELDERQR VEEALRISQV RLARILDIAD DAIISINGNQ QITLFNQGAE KIFGYSAEAI IGQRLDTLIP QRFTQAHRQH VADFGQAPNL ARRMGERREI FGRRQDGTEF PAEASISKFQ LDKEVFYTVI LRDITERKQI ERMKDEFVSV VSHELRTPLT SIHGSLGMLA SGLLPADSEQ GRRLLEIATD STERLVRLIN DILDIERIES GRVKMERESC NLTDLIESAV SIMRPLANKA GVKLSVSHPS IQLWVDPDRI VQTLTNLLSN AIKFSTAEKT VWLVAQQYGD ELLVTVKDNG RGIPADKLDS IFERFQQVDS SDSRNHDGTG LGLAICQSIV QQHGGRIWAE SVLSEGSNFY FTLPILPISP NSELPDSLTH YPLSPEGDLP SPIPSTHSPL VLVCDDDPLI RTELQSLLEQ GGYRVVTVAT GKEAIASAST QHPDVIVLDL LMPGMNGWET MAMLKESTET KHIPIVICSV YKPTTNNQPS SDFVDWISKP VQESYLLHSL RQAIAKSSRR VRILIVEDDA DLAELFVTLF ERHDIETFSA KTGREAIHLS QEVNPDLLIL DLILPETDGF AVVDWLQKHQ RLCNIPVVVY SAKDLDESER KRLKLGHTEF LTKGRVTTKE FEQRVIELLQ RITPTNVRD
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