| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2562 |
|---|
| Symbol | |
|---|
| ID | 3679467 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 3163475 |
|---|
| End bp | 3164788 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637717908 |
|---|
| Product | response regulator receiver Signal transduction histidine kinase |
|---|
| Protein accession | YP_323072 |
|---|
| Protein GI | 75908776 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 50 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGCAG AACCTCTTGT ACAGCCAACA TATGTCCTTT TAGTAGATGA CAACCCCAAT
AATCTGAAAG TTTTATCAGA AGCAGTTCAG GGATGTGGTT GGAAAGCACT CATGGCGACG
GATGGAGAGT CGGCGCTAGA ACAAACAGAA TATGCTCATC CTGATTTGAT TCTCCTTGAT
GTCATGATGC CGGGTATTGA TGGATTTGAA ACTTGCCGTA GATTGAAAGC CAATCCCATC
ACTCAGAATA CTCCGGTCAT TTTCATGACA GCGTTGTCTG ATGCTACAGA TAAAGTCAAA
GGACTAGAAA TTGGTGCAGT TGACTACATT ACCAAACCCT TCCAACACGA AGAAGTTATT
GCTCGATTAA AGTTACACCT GAAAATATCC CATCTCACCC GCACCCTGGA ACAAAAAGTC
CAAGAACGTA CAGCAGAATT GACTCAATCT CTACAACAGT TAAAGCAAAC CCAAATACAA
CTCATCCAAA GTGAAAAAAT GTCCACCCTT GGACAACTTG TTGCTGGTAT AGGTCATGAG
ATTAATAACC CGATTGGTTT TATTAGTGGA AATTGCTCTC ATATTGAGGA ATATGTCAAG
GATATTCTTC GTTTAGTTCA TCTCCAACAG CAAAAATTAT CACACTCGGA CCCGGAAATT
GAAGAACTAG TTGAAGAAAT TGACTTAGAG TATTTAGCAG AAGATTTACC AAAAATTTTG
GGATCCATGC ACCAAGGGAT TGATCGGCTA AAGGATATCA GCCTTTCTCT GCGAACCTTT
GCCCGATCTG ATATCTCCTC TAAAGTAGAG TTTCAAATTC ATGAAGGTAT GAATAGCACC
TTAATGTTAC TGAAACATCG GCTGAAAGAC CAAAGCGATC GCCCAAAAAT AGAGGTGATC
AAAGAATATG GTACTTTGCC ACCAATCACT TGCTATCCTG GACAGCTTAA CCAGGTATTT
ATGAACATTA TTGCCAACGC TATTGATGCC TTTGATGATC TCCATCAGAA ATTTTCAGAT
CAAGAAATAA AGGCTTCTGA ACCTCATACA ATTACAATTA ATACATCGGT TGATCAGGAG
CAAGCAAGTG TAACAATTTG CATTGAAGAT AATGCTCTTG GTATACCTCC TGAGGTGCAA
GACAGAATTT TTGAGCCATC TTTTACAACT AAGGCCGTAG GTAAGGGAAC TGGACTAGGA
TTAGCCATCA CCCAGCAAAT TATTGTCGAT AAGCACAACG GACAAATTAA GTGCTTGTCA
ACTTTGGGTA AGGGAACAAA ATTTATTATT ACTTTGCCAA TCTCTAGTCA GTAA
|
|---|
| Protein sequence | MIAEPLVQPT YVLLVDDNPN NLKVLSEAVQ GCGWKALMAT DGESALEQTE YAHPDLILLD
VMMPGIDGFE TCRRLKANPI TQNTPVIFMT ALSDATDKVK GLEIGAVDYI TKPFQHEEVI
ARLKLHLKIS HLTRTLEQKV QERTAELTQS LQQLKQTQIQ LIQSEKMSTL GQLVAGIGHE
INNPIGFISG NCSHIEEYVK DILRLVHLQQ QKLSHSDPEI EELVEEIDLE YLAEDLPKIL
GSMHQGIDRL KDISLSLRTF ARSDISSKVE FQIHEGMNST LMLLKHRLKD QSDRPKIEVI
KEYGTLPPIT CYPGQLNQVF MNIIANAIDA FDDLHQKFSD QEIKASEPHT ITINTSVDQE
QASVTICIED NALGIPPEVQ DRIFEPSFTT KAVGKGTGLG LAITQQIIVD KHNGQIKCLS
TLGKGTKFII TLPISSQ
|
|---|
| |