| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1150 |
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| Symbol | |
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| ID | 8534302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 1249049 |
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| End bp | 1250692 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646383539 |
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| Product | response regulator receiver modulated diguanylate cyclase |
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| Protein accession | YP_003263033 |
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| Protein GI | 261855750 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAACA CACATTCATT CGATCATAGA ACCTCATCAG AGGGACTGGA CGCACAGCCA
GTGAATTGGG AACTCGCGGT AGCTTCTATG GAATCCGTAC TCTCCCAGTC ATCTGCTCAT
CGCAAAACCC GTCTTGTGGA TTTGCTGGTT CAGGCTGAAA ACATGCTCAT GGATGCGCGT
CGAATTCGTC AGCCACAATT GGCAAATGCT TTGGATCGGC TTTTGCACGC CATCCAGCAG
GAATTGATTT CGCCCGCAGA GGATTTCAGT CGTCTGATTC GATTGATTCG GCATATTGAT
CGCATTATCA AGAACATGCT CCTTATTTCT CATAAAGATG CCCTGCCCGT TGCATTGATT
ATCAGTGCCC AGGAACCTTC TGATGTGTTG AGAGATGCCT TGTCGCGTGC TGGGTTTGCG
CCCAGGACAA TCAATGCCCA AGTCCTCAAT CAGGCTCTCG AGCATGACAA GATCAAAGCG
CTCGCTGATG AGGCGGAATT GATCATGCTT CTGGCTCAAG ATGATGAATC ATTCGCTAAT
CTGGAGCTCC CGTTTACGTT GCTGGAAAAC GAACTTCGGC ATAAGACATC GCTTCTGATT
TCAAGCAAGG ACTCCTTTCA GATTCGTGCT GCATCCGCCA AAGCTGGTGT CTCGCATTTC
CTTACAGAGC CGCTTGATGT GAGTCGCCTC AATATGTTAT TGCAATCTTC TCGCATTTTG
GATGAAGAAA ATAAACCGCT CAGAGTGCTG ATGGTTGATG ACATGGTGAC TGCCGGTGTT
TATTGGGGAA AGCACTTCCA GAAGCAAAAC ATAAATTTCC GTTTTGAATC GAAGCCCGAA
CAGGCTTACC GCAGTGCCGT CGAGATGCAA CCGGATATCA TCCTGCTTGA TCTTTATATG
CCGGATATTG ATGGAATCGA TTTGGCTAAG ATTTTCCGAG AGCACCCCCG TTTGCTTGAT
GTGCCGATTT TATTCATGTC GACCGAGGAA AATGATCGCC GCCGCATGAA CGCCAAAATT
CAAGGCGGTG ACGATTTCCT CAATAAAACG ATTGCGATCG ACGATCTGCT GAAAATGGTT
CGTTATCGGG CTTTGCGCTA TCGCCAGTCC ATGGCTGAAA AGCGCAGCGA CTCTCTGACT
GGTTTGCTGA ACCACAATGC CATCAAGGAT TTGGTCGAGG CTGAGATCGA TCGTGCGAAC
CGCCAGAACC AGCCGTTGTC TGTCGTTTTG ATTGATATCG ATCATTTCAA AAACGTGAAC
GATACCTTTG GCCATCAGGC TGGTGACATC GTCATCAGAA AGCTTTCAAA TTTGTTGAAT
ACGCGACTGC GACGCTACGA TGGTGTCGGG CGGTACGGTG GCGAAGAATT CATGATCACC
CTGCCAAACA CAGACGAGCA AACTGCCGCC CATTTGATCA ATCGGCTTAG AGTGCAATTC
GGTCAGTCAG CCATACGTAC AGAGAACGGC AGCAATATGT TATGCACGTT CAGTGCCGGT
ATTGCCAGTT TCCCGCGCTT TTTGGACCTG ACATCTTTGA TTGAAGCGGC TGATCAGCAT
TTGTATGTGG CTAAAGCCAA TGGTAGAAAT CGGGTTGTTT GTAGTGAAGA GGCACTCGGC
GCATCTCCTC CCAAGCCCGA CTGA
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| Protein sequence | MDNTHSFDHR TSSEGLDAQP VNWELAVASM ESVLSQSSAH RKTRLVDLLV QAENMLMDAR
RIRQPQLANA LDRLLHAIQQ ELISPAEDFS RLIRLIRHID RIIKNMLLIS HKDALPVALI
ISAQEPSDVL RDALSRAGFA PRTINAQVLN QALEHDKIKA LADEAELIML LAQDDESFAN
LELPFTLLEN ELRHKTSLLI SSKDSFQIRA ASAKAGVSHF LTEPLDVSRL NMLLQSSRIL
DEENKPLRVL MVDDMVTAGV YWGKHFQKQN INFRFESKPE QAYRSAVEMQ PDIILLDLYM
PDIDGIDLAK IFREHPRLLD VPILFMSTEE NDRRRMNAKI QGGDDFLNKT IAIDDLLKMV
RYRALRYRQS MAEKRSDSLT GLLNHNAIKD LVEAEIDRAN RQNQPLSVVL IDIDHFKNVN
DTFGHQAGDI VIRKLSNLLN TRLRRYDGVG RYGGEEFMIT LPNTDEQTAA HLINRLRVQF
GQSAIRTENG SNMLCTFSAG IASFPRFLDL TSLIEAADQH LYVAKANGRN RVVCSEEALG
ASPPKPD
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