| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2104 |
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| Symbol | |
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| ID | 7088397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 2494368 |
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| End bp | 2496008 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 643461007 |
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| Product | response regulator receiver modulated diguanylate cyclase |
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| Protein accession | YP_002358031 |
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| Protein GI | 217973280 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0835719 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTTG AAGATTCGTT AGAGCAACTT AAACGACAGT TTTTACATGC ACTGCCGGAT
AAAAAGAAAC AAATCATTAC CCTGTGGATT TCATTGCGTA AAAATTGGAA TGCACACATG
TTGTCGGCTG TGTATCGTGA GGTGCATAAC TTAAAAGGAT CGAGCGAGAC CTTTGGGTTG
TCGGATACCA AACACATAGT CGATAAACTT GAGCTGCAGC TTAAAGGTCT GCTCAATGCG
CCAGCTCCCG AACTTCCTAC TATCAAAGGC TTAGATACCC TCTTCCACCA GTTGTTGCAA
AACAATATGC GCGGTCAACC GTCGGCGCCA GTGGTGGAGG CGCAAATGCA GCAAAGCCCC
TATAAACCGG CTAAGGCGCG GCATGATCAC CATATTGCCA TCATAGAGGA CGATGGTAAT
GTTGGCGCGA TGATCACAAA GCAACTGCGA GAGTTCGGTT TTAGTGTGCA GCATTTTTTG
AATTTCACGA GCTTTCTGGT GGTGCAAAAT GAAACGCCCT TCGATCTGAT TCTGTTGGAT
TTAATTCTGC CAGATTGGAC TGAAGAGGCC TTGTTCGAAG CAGCCACAGA GTTTGAAAAG
AACAATACCC GAGTGTTTGT TTTATCCTCG CGCGGGGATT TTGACATGCG GCTATTGGCT
ATTCGTGCCA ACGTTAGCGA ATATTTTGTT AAACCTGCGG AAACTACCTT ATTGGTGCGC
AAAATCCATC AATCTCTCAA GATGTCAGAG AAGCAGCCCT TGAAGGTGTT ACTGGTGGAT
GATCAACAGT CTATGGTGGA TTATTTTTCA AGCTTGTTAC GCAGTCACGG TTTGATGGTG
AAAGGGTTAT CTAGTGCTGA GCAAGTTTTG CCTGCCCTTG AGCAGTTTGA GCCTGATTTG
TTCATCTTTG ATTTATACAT GCCTGAGGTG AACGGGCTTG AACTGGCAAA GATGATACGC
CAACTGGATA AATACACCTC TAGCCCAATT CTCGTGTTGA GCTCTGACGA TACGATGCAG
AATAAAGTCA GCATCATACA AGCGGGATCA GATGACTTAA TTTCGAAGCA AACCGCGCCG
AGCTTATTTG TTGCGCAGGT GATATCTCGC GCCCAACGTG GCCATGATAT TCGCAGTTCG
GCAAGCCGCG ACAGCTTAAC GGGATTGTTA AACCATACCC AGATTCTGGT TGCCGCGAGG
CGCTGCTATA ACGTGGCGAG GCGAATTAAC TCTCAGGTTT GTATCGCCAT GTTCGATTTG
GACCACTTCA AAAAAGTGAA CGACACCTAT GGCCATGCCG GTGGTGACAA GGTGTTGCTA
GCCTTTGCCC ATCTATTACA ACAATCCTTA CGGCAAACTG ACTTTACCGG TCGCTATGGC
GGCGAGGAAT TTATGTTAGT GCTGCCAGAT ATGCAAAAAC CATTGGCAAT AGCTAAGTTA
AATGCGATCC GCGAGAGCTT TAGCCATATT GTCTTTGTCG AAGATGCCGT CGAGTTTAAG
GTGACGCTCA GCGGCGGTTT AGTGTTCTCG GACGAATGTG AGGAGTTTCA AGATTGTCTG
TTACTGGCAG ATAAAAACCT TTACGAAGCG AAACGTTTAG GCCGAAATCA ATTAGTAGTT
TCACCAAGTG CACAGGATTG A
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| Protein sequence | MSFEDSLEQL KRQFLHALPD KKKQIITLWI SLRKNWNAHM LSAVYREVHN LKGSSETFGL
SDTKHIVDKL ELQLKGLLNA PAPELPTIKG LDTLFHQLLQ NNMRGQPSAP VVEAQMQQSP
YKPAKARHDH HIAIIEDDGN VGAMITKQLR EFGFSVQHFL NFTSFLVVQN ETPFDLILLD
LILPDWTEEA LFEAATEFEK NNTRVFVLSS RGDFDMRLLA IRANVSEYFV KPAETTLLVR
KIHQSLKMSE KQPLKVLLVD DQQSMVDYFS SLLRSHGLMV KGLSSAEQVL PALEQFEPDL
FIFDLYMPEV NGLELAKMIR QLDKYTSSPI LVLSSDDTMQ NKVSIIQAGS DDLISKQTAP
SLFVAQVISR AQRGHDIRSS ASRDSLTGLL NHTQILVAAR RCYNVARRIN SQVCIAMFDL
DHFKKVNDTY GHAGGDKVLL AFAHLLQQSL RQTDFTGRYG GEEFMLVLPD MQKPLAIAKL
NAIRESFSHI VFVEDAVEFK VTLSGGLVFS DECEEFQDCL LLADKNLYEA KRLGRNQLVV
SPSAQD
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