| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3505 |
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| Symbol | |
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| ID | 4072764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 4136828 |
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| End bp | 4138825 |
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| Gene Length | 1998 bp |
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| Protein Length | 665 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637985528 |
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| Product | response regulator receiver modulated diguanylate cyclase |
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| Protein accession | YP_592580 |
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| Protein GI | 94970532 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCACT CGCCCGCGAA CCCAACCCAA CAGACCAAAG CCATGTTGGC CGTGGTGTGG
AACAAGAACC GCGACCTGCT CCTGCACCGG CTCGATACTA TCGAGAGTTT TTGCCGGCAA
TTGCCGGATT CCGCTTCCGA CGTGGACCTT CGCTCCGATG CCTCTTCGGA CGCCCATAAG
CTGGCTGGAT CCCTAGGAAT GTTCGGGCTC TCGGAGGGGA CCTCGGTCGC TCGCGAAATC
GAGTATCGCC TCCGCGAAGA TGCCGCCGAC GCACTACTGA CTGCGAATAT CCCTGGATTG
GCTTCGCAAT TGCGTTCTCT GATCGAGAAG TTTCATGTCA CCGTCGCCGA GCCTGAGCCT
GAACGACGAA GGAAGTTGCT GATCGTCGAA GGAGATCCAG TTGTGGCGCG CGGGATCGCG
GCGACGGCGG AGAAGCGCGG TATCGAATCC AGGACCGCAG TGGATCTCCC CGGCGCTCGC
CAACTCCTGC AGGAAGATCG GTTCGACGTA CTTGTCCTCG ACCTCGCAAC CGCCCAGTTG
AGCGGAAACC CCGCAGTGGA AGACGAAAGC GATCAGGTGC GCGACTTGAT ACTCTCGCGC
GCACCGATGC AGGTCCTCGC GCTTACGTCC GAAGATACCT TTGAAGATCG CGTGACCGCA
GCCCAAGTCG GCGCTCACGG ATTCTTGCCG AAAACCGTGC CGGTGATGGA GATCGTGGAC
ACCTGCGAAC ATCTGCTCGA TCTGCAGAGC GCGCAGTTCA AAGTTCTGAT CGTGGATGAC
GACGTGGCTG TGCTCAACGC CATCCAGGTG TTGCTCGACC AGCACTCGAT TCGAGTAACC
TCACTTGCCG ATCCGCGCCT CTTCTGGAGC ATTCTGGAAG AGACCTCGCC GGACCTCGTG
ATCCTCGATC TCGAAATGCC CAATTTTTCG GGCCTCGAAC TTTGCCGTGC AATTCGCAAT
GACAGTCATT GGAACCGATT GCCGGTGTTG TTCCTTAGCT CAACCTCCGA CGCCCTAACG
GTGACTGGCA TTTTCTCGGC CGGCGCAGAT GATTTCGTCG CCAAGCCGAT CATTGACATT
GAATTGATCA CGCGCGTGCG CAACCGCCTC GATCGCGACC GGCTTTATCG CAACCTCTCC
GATTACGATC CGCTCACCAG CGTACGCAAT CGCCGCAGCT CAAACGTCGT CATCGCAAAC
TATCTCCGCT TGGCCGAACG ACATGGCTTG CCGTTGTCGC TTGCGGTCAT TGATCTCGAC
AAATTCAAAC GGGTCAACGA TACCTATGGC CACCAAGCCG GCGACGACGT GCTGCAACAC
CTCGGCTCAC TTCTGCGACA ATCCTTCCGC AGCGAAGACG TAGTTGCGCG CTGGGGCGGC
GAGGAATTCG TCGTGGCAAT GTTCGCTATG CGCCGCGGTG ATGCCATCGA ACGCATGGCG
CACGTCCTCG AAGGCCTCGA GGCGCACGCA TTTGAGGCAT CGCAGGGTGT GCATTTTCAC
GTTTCTTTTA GCGCCGGATT ATCGGAGTTC CCTGCCGACG GAAAGGATCT GCACTCCCTC
TATCGCGTCG CCGACGAAGC TCTGTATCGC GCGAAGGCTG CGGGTGGGCG TCGTATTTAC
TCGCAATACA CGGAACCGGC CGAAACCCAG GCCCCATTCG ACATCGCTGT CGTGTGCGCA
GATGTCGCGG TCTCGGCGCC GCTGCGGCAC GTCCTCGAGA TGCGCGGCTA TTCGGTGGAG
CTTTACCAGA GTGTAAGCGC GGCTTTGCAG GACCTCGCCG GAGCGGAGGC CTCTGCCTGT
GCCCGTGCTG TGTTGGTCGA GCCGCCGCTT GCAACCGCAG AGTTCCTACG CAAGCTGCGC
GCGCAGTCTC CAGCACCGGT GGTGATCGTC CTCGGCGAGA TCGCCGACCC CGGCGACGCC
GGAGTCGAAG TCCTCCAGCA GCCCTACAAA CTCTCGCACC TCATGCAGCG CCTCCGCCGC
ATCCTGCCAC GCTCATAA
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| Protein sequence | MSHSPANPTQ QTKAMLAVVW NKNRDLLLHR LDTIESFCRQ LPDSASDVDL RSDASSDAHK
LAGSLGMFGL SEGTSVAREI EYRLREDAAD ALLTANIPGL ASQLRSLIEK FHVTVAEPEP
ERRRKLLIVE GDPVVARGIA ATAEKRGIES RTAVDLPGAR QLLQEDRFDV LVLDLATAQL
SGNPAVEDES DQVRDLILSR APMQVLALTS EDTFEDRVTA AQVGAHGFLP KTVPVMEIVD
TCEHLLDLQS AQFKVLIVDD DVAVLNAIQV LLDQHSIRVT SLADPRLFWS ILEETSPDLV
ILDLEMPNFS GLELCRAIRN DSHWNRLPVL FLSSTSDALT VTGIFSAGAD DFVAKPIIDI
ELITRVRNRL DRDRLYRNLS DYDPLTSVRN RRSSNVVIAN YLRLAERHGL PLSLAVIDLD
KFKRVNDTYG HQAGDDVLQH LGSLLRQSFR SEDVVARWGG EEFVVAMFAM RRGDAIERMA
HVLEGLEAHA FEASQGVHFH VSFSAGLSEF PADGKDLHSL YRVADEALYR AKAAGGRRIY
SQYTEPAETQ APFDIAVVCA DVAVSAPLRH VLEMRGYSVE LYQSVSAALQ DLAGAEASAC
ARAVLVEPPL ATAEFLRKLR AQSPAPVVIV LGEIADPGDA GVEVLQQPYK LSHLMQRLRR
ILPRS
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