Gene Acid345_3505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3505 
Symbol 
ID4072764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4136828 
End bp4138825 
Gene Length1998 bp 
Protein Length665 aa 
Translation table11 
GC content60% 
IMG OID637985528 
Productresponse regulator receiver modulated diguanylate cyclase 
Protein accessionYP_592580 
Protein GI94970532 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCACT CGCCCGCGAA CCCAACCCAA CAGACCAAAG CCATGTTGGC CGTGGTGTGG 
AACAAGAACC GCGACCTGCT CCTGCACCGG CTCGATACTA TCGAGAGTTT TTGCCGGCAA
TTGCCGGATT CCGCTTCCGA CGTGGACCTT CGCTCCGATG CCTCTTCGGA CGCCCATAAG
CTGGCTGGAT CCCTAGGAAT GTTCGGGCTC TCGGAGGGGA CCTCGGTCGC TCGCGAAATC
GAGTATCGCC TCCGCGAAGA TGCCGCCGAC GCACTACTGA CTGCGAATAT CCCTGGATTG
GCTTCGCAAT TGCGTTCTCT GATCGAGAAG TTTCATGTCA CCGTCGCCGA GCCTGAGCCT
GAACGACGAA GGAAGTTGCT GATCGTCGAA GGAGATCCAG TTGTGGCGCG CGGGATCGCG
GCGACGGCGG AGAAGCGCGG TATCGAATCC AGGACCGCAG TGGATCTCCC CGGCGCTCGC
CAACTCCTGC AGGAAGATCG GTTCGACGTA CTTGTCCTCG ACCTCGCAAC CGCCCAGTTG
AGCGGAAACC CCGCAGTGGA AGACGAAAGC GATCAGGTGC GCGACTTGAT ACTCTCGCGC
GCACCGATGC AGGTCCTCGC GCTTACGTCC GAAGATACCT TTGAAGATCG CGTGACCGCA
GCCCAAGTCG GCGCTCACGG ATTCTTGCCG AAAACCGTGC CGGTGATGGA GATCGTGGAC
ACCTGCGAAC ATCTGCTCGA TCTGCAGAGC GCGCAGTTCA AAGTTCTGAT CGTGGATGAC
GACGTGGCTG TGCTCAACGC CATCCAGGTG TTGCTCGACC AGCACTCGAT TCGAGTAACC
TCACTTGCCG ATCCGCGCCT CTTCTGGAGC ATTCTGGAAG AGACCTCGCC GGACCTCGTG
ATCCTCGATC TCGAAATGCC CAATTTTTCG GGCCTCGAAC TTTGCCGTGC AATTCGCAAT
GACAGTCATT GGAACCGATT GCCGGTGTTG TTCCTTAGCT CAACCTCCGA CGCCCTAACG
GTGACTGGCA TTTTCTCGGC CGGCGCAGAT GATTTCGTCG CCAAGCCGAT CATTGACATT
GAATTGATCA CGCGCGTGCG CAACCGCCTC GATCGCGACC GGCTTTATCG CAACCTCTCC
GATTACGATC CGCTCACCAG CGTACGCAAT CGCCGCAGCT CAAACGTCGT CATCGCAAAC
TATCTCCGCT TGGCCGAACG ACATGGCTTG CCGTTGTCGC TTGCGGTCAT TGATCTCGAC
AAATTCAAAC GGGTCAACGA TACCTATGGC CACCAAGCCG GCGACGACGT GCTGCAACAC
CTCGGCTCAC TTCTGCGACA ATCCTTCCGC AGCGAAGACG TAGTTGCGCG CTGGGGCGGC
GAGGAATTCG TCGTGGCAAT GTTCGCTATG CGCCGCGGTG ATGCCATCGA ACGCATGGCG
CACGTCCTCG AAGGCCTCGA GGCGCACGCA TTTGAGGCAT CGCAGGGTGT GCATTTTCAC
GTTTCTTTTA GCGCCGGATT ATCGGAGTTC CCTGCCGACG GAAAGGATCT GCACTCCCTC
TATCGCGTCG CCGACGAAGC TCTGTATCGC GCGAAGGCTG CGGGTGGGCG TCGTATTTAC
TCGCAATACA CGGAACCGGC CGAAACCCAG GCCCCATTCG ACATCGCTGT CGTGTGCGCA
GATGTCGCGG TCTCGGCGCC GCTGCGGCAC GTCCTCGAGA TGCGCGGCTA TTCGGTGGAG
CTTTACCAGA GTGTAAGCGC GGCTTTGCAG GACCTCGCCG GAGCGGAGGC CTCTGCCTGT
GCCCGTGCTG TGTTGGTCGA GCCGCCGCTT GCAACCGCAG AGTTCCTACG CAAGCTGCGC
GCGCAGTCTC CAGCACCGGT GGTGATCGTC CTCGGCGAGA TCGCCGACCC CGGCGACGCC
GGAGTCGAAG TCCTCCAGCA GCCCTACAAA CTCTCGCACC TCATGCAGCG CCTCCGCCGC
ATCCTGCCAC GCTCATAA
 
Protein sequence
MSHSPANPTQ QTKAMLAVVW NKNRDLLLHR LDTIESFCRQ LPDSASDVDL RSDASSDAHK 
LAGSLGMFGL SEGTSVAREI EYRLREDAAD ALLTANIPGL ASQLRSLIEK FHVTVAEPEP
ERRRKLLIVE GDPVVARGIA ATAEKRGIES RTAVDLPGAR QLLQEDRFDV LVLDLATAQL
SGNPAVEDES DQVRDLILSR APMQVLALTS EDTFEDRVTA AQVGAHGFLP KTVPVMEIVD
TCEHLLDLQS AQFKVLIVDD DVAVLNAIQV LLDQHSIRVT SLADPRLFWS ILEETSPDLV
ILDLEMPNFS GLELCRAIRN DSHWNRLPVL FLSSTSDALT VTGIFSAGAD DFVAKPIIDI
ELITRVRNRL DRDRLYRNLS DYDPLTSVRN RRSSNVVIAN YLRLAERHGL PLSLAVIDLD
KFKRVNDTYG HQAGDDVLQH LGSLLRQSFR SEDVVARWGG EEFVVAMFAM RRGDAIERMA
HVLEGLEAHA FEASQGVHFH VSFSAGLSEF PADGKDLHSL YRVADEALYR AKAAGGRRIY
SQYTEPAETQ APFDIAVVCA DVAVSAPLRH VLEMRGYSVE LYQSVSAALQ DLAGAEASAC
ARAVLVEPPL ATAEFLRKLR AQSPAPVVIV LGEIADPGDA GVEVLQQPYK LSHLMQRLRR
ILPRS