More than 300 homologs were found in PanDaTox collection
for query gene Rleg2_1773 on replicon NC_011369
Organism: Rhizobium leguminosarum bv. trifolii WSM2304



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004311  BRA1180  sugar ABC transporter, periplasmic sugar-binding protein, putative  77.62 
 
 
421 aa  653    Brucella suis 1330  Bacteria  normal  0.409061  n/a   
 
 
-
 
NC_009667  Oant_1666  extracellular solute-binding protein  77.38 
 
 
421 aa  637    Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_1773  extracellular solute-binding protein family 1  100 
 
 
421 aa  856    Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.0165592 
 
 
-
 
NC_007958  RPD_3151  extracellular solute-binding protein  43.26 
 
 
426 aa  347  2e-94  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.345086 
 
 
-
 
NC_007778  RPB_0174  extracellular solute-binding protein  42.82 
 
 
426 aa  343  2e-93  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.396862  normal 
 
 
-
 
NC_011004  Rpal_0129  extracellular solute-binding protein family 1  41.61 
 
 
426 aa  340  2.9999999999999998e-92  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.57996  n/a   
 
 
-
 
NC_009429  Rsph17025_3553  hypothetical protein  37.9 
 
 
427 aa  273  4.0000000000000004e-72  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_011988  Avi_5331  ABC transporter substrate binding protein (sugar)  37.19 
 
 
431 aa  268  2e-70  Agrobacterium vitis S4  Bacteria  normal  0.998389  n/a   
 
 
-
 
NC_009667  Oant_0637  extracellular solute-binding protein  37.02 
 
 
425 aa  266  4e-70  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_011981  Avi_7590  ABC transporter substrate binding protein (sugar)  33.65 
 
 
447 aa  223  4e-57  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1484  extracellular solute-binding protein  32.49 
 
 
444 aa  194  2e-48  Moorella thermoacetica ATCC 39073  Bacteria  unclonable  0.00000000000980441  normal 
 
 
-
 
NC_009921  Franean1_3944  extracellular solute-binding protein  30.1 
 
 
464 aa  172  1e-41  Frankia sp. EAN1pec  Bacteria  normal  0.920276  normal  0.0416082 
 
 
-
 
NC_007777  Francci3_2834  extracellular solute-binding protein  30.42 
 
 
459 aa  162  9e-39  Frankia sp. CcI3  Bacteria  normal  0.873121  normal 
 
 
-
 
NC_007777  Francci3_2252  extracellular solute-binding protein  28.5 
 
 
469 aa  125  2e-27  Frankia sp. CcI3  Bacteria  hitchhiker  0.00844632  hitchhiker  0.0063434 
 
 
-
 
NC_009921  Franean1_1895  extracellular solute-binding protein  27.82 
 
 
445 aa  122  9.999999999999999e-27  Frankia sp. EAN1pec  Bacteria  normal  0.854658  normal 
 
 
-
 
NC_013721  HMPREF0424_1316  extracellular solute-binding protein  27.78 
 
 
423 aa  121  1.9999999999999998e-26  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_009616  Tmel_0753  extracellular solute-binding protein  24.37 
 
 
437 aa  114  4.0000000000000004e-24  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0721  extracellular solute-binding protein  25.34 
 
 
437 aa  112  1.0000000000000001e-23  Petrotoga mobilis SJ95  Bacteria  normal  0.540981  n/a   
 
 
-
 
NC_010483  TRQ2_1696  extracellular solute-binding protein  25.94 
 
 
436 aa  112  1.0000000000000001e-23  Thermotoga sp. RQ2  Bacteria  hitchhiker  0.00506774  n/a   
 
 
-
 
NC_010003  Pmob_0289  extracellular solute-binding protein  25.34 
 
 
437 aa  111  3e-23  Petrotoga mobilis SJ95  Bacteria  unclonable  0.00000019091  n/a   
 
 
-
 
NC_011894  Mnod_6751  extracellular solute-binding protein family 1  27.36 
 
 
441 aa  110  4.0000000000000004e-23  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009939  Dgeo_2919  ABC-type sugar transport system, periplasmic component  26.62 
 
 
407 aa  110  4.0000000000000004e-23  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_011769  DvMF_0656  extracellular solute-binding protein family 1  24.76 
 
 
431 aa  109  8.000000000000001e-23  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.31335 
 
 
-
 
NC_014212  Mesil_0955  extracellular solute-binding protein family 1  26.93 
 
 
437 aa  108  1e-22  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.152307 
 
 
-
 
NC_013526  Tter_2294  extracellular solute-binding protein family 1  25.81 
 
 
448 aa  107  5e-22  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0224  extracellular solute-binding protein  25.39 
 
 
431 aa  103  6e-21  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_2712  glycerol-3-phosphate transporter periplasmic binding protein  26.12 
 
 
443 aa  103  8e-21  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.290307  n/a   
 
 
-
 
NC_008542  Bcen2424_0395  glycerol-3-phosphate transporter periplasmic binding protein  26.12 
 
 
443 aa  103  8e-21  Burkholderia cenocepacia HI2424  Bacteria  normal  0.954301  n/a   
 
 
-
 
NC_010508  Bcenmc03_0374  glycerol-3-phosphate transporter periplasmic binding protein  25.81 
 
 
444 aa  103  8e-21  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_0845  extracellular solute-binding protein family 1  27.15 
 
 
435 aa  102  1e-20  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A3492  glycerol-3-phosphate transporter periplasmic binding protein  26.04 
 
 
444 aa  101  2e-20  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_0323  glycerol-3-phosphate transporter periplasmic binding protein  26.02 
 
 
444 aa  102  2e-20  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.839712 
 
 
-
 
NC_008390  Bamb_0314  glycerol-3-phosphate transporter periplasmic binding protein  26.02 
 
 
444 aa  101  2e-20  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_1392  extracellular solute-binding protein family 1  25.51 
 
 
445 aa  101  3e-20  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_0631  extracellular solute-binding protein family 1  27.42 
 
 
435 aa  100  4e-20  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_0298  glycerol-3-phosphate transporter periplasmic binding protein  25.79 
 
 
444 aa  100  6e-20  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_3509  glycerol-3-phosphate transporter periplasmic binding protein  25.51 
 
 
441 aa  98.6  2e-19  Burkholderia phytofirmans PsJN  Bacteria  normal  0.839022  normal  0.0272066 
 
 
-
 
NC_012912  Dd1591_3386  extracellular solute-binding protein family 1  26.15 
 
 
440 aa  98.2  2e-19  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3697  glycerol-3-phosphate transporter periplasmic binding protein  25.59 
 
 
441 aa  97.4  4e-19  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A3748  glycerol-3-phosphate transporter periplasmic binding protein  26.28 
 
 
438 aa  97.4  4e-19  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_006348  BMA2744  glycerol-3-phosphate transporter periplasmic binding protein  25.59 
 
 
441 aa  97.4  5e-19  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_3726  glycerol-3-phosphate transporter periplasmic binding protein  25.59 
 
 
441 aa  97.4  5e-19  Burkholderia pseudomallei 1710b  Bacteria  normal  0.268589  n/a   
 
 
-
 
NC_010511  M446_6664  extracellular solute-binding protein  26.03 
 
 
452 aa  97.1  5e-19  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0689323 
 
 
-
 
NC_008785  BMASAVP1_A3209  glycerol-3-phosphate transporter periplasmic binding protein  25.59 
 
 
441 aa  97.4  5e-19  Burkholderia mallei SAVP1  Bacteria  normal  0.0248662  n/a   
 
 
-
 
NC_008836  BMA10229_A1760  glycerol-3-phosphate transporter periplasmic binding protein  25.59 
 
 
441 aa  97.4  5e-19  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_3755  glycerol-3-phosphate transporter periplasmic binding protein  25.59 
 
 
441 aa  97.1  5e-19  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2794  glycerol-3-phosphate transporter periplasmic binding protein  25.59 
 
 
441 aa  97.4  5e-19  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A3826  glycerol-3-phosphate transporter periplasmic binding protein  26.28 
 
 
438 aa  96.7  6e-19  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B3759  glycerol-3-phosphate transporter periplasmic binding protein  26.28 
 
 
438 aa  96.7  6e-19  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C3869  glycerol-3-phosphate transporter periplasmic binding protein  26.28 
 
 
438 aa  96.7  6e-19  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
CP001509  ECD_03302  glycerol-3-phosphate transporter subunit  26.13 
 
 
438 aa  96.7  7e-19  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_0262  extracellular solute-binding protein family 1  26.13 
 
 
438 aa  96.7  7e-19  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc1264  glycerol-3-phosphate-binding periplasmic lipoprotein signal peptide  26.19 
 
 
438 aa  96.7  7e-19  Ralstonia solanacearum GMI1000  Bacteria  normal  0.400828  normal  0.517414 
 
 
-
 
NC_010468  EcolC_0263  glycerol-3-phosphate transporter periplasmic binding protein  26.13 
 
 
438 aa  96.7  7e-19  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A0448  glycerol-3-phosphate transporter periplasmic binding protein  25.06 
 
 
441 aa  96.7  7e-19  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A3928  glycerol-3-phosphate transporter periplasmic binding protein  26.28 
 
 
438 aa  96.7  7e-19  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_012892  B21_03255  hypothetical protein  26.13 
 
 
438 aa  96.7  7e-19  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E3870  glycerol-3-phosphate transporter periplasmic binding protein  26.13 
 
 
438 aa  96.7  7e-19  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A3650  glycerol-3-phosphate transporter periplasmic binding protein  26.13 
 
 
438 aa  96.7  7e-19  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_4767  glycerol-3-phosphate transporter periplasmic binding protein  26.13 
 
 
438 aa  96.7  7e-19  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal  0.552805 
 
 
-
 
NC_009801  EcE24377A_3931  glycerol-3-phosphate transporter periplasmic binding protein  26.13 
 
 
438 aa  96.3  8e-19  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I3021  glycerol-3-phosphate transporter periplasmic binding protein  25.83 
 
 
441 aa  96.3  8e-19  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2466  extracellular solute-binding protein family 1  27.36 
 
 
415 aa  95.5  2e-18  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.0930087 
 
 
-
 
NC_012856  Rpic12D_1185  extracellular solute-binding protein family 1  26.96 
 
 
438 aa  95.1  2e-18  Ralstonia pickettii 12D  Bacteria  normal  0.276437  normal 
 
 
-
 
NC_010498  EcSMS35_3732  glycerol-3-phosphate transporter periplasmic binding protein  25.95 
 
 
438 aa  95.5  2e-18  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_0297  extracellular solute-binding protein family 1  28.33 
 
 
453 aa  94.7  2e-18  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0248346 
 
 
-
 
NC_014158  Tpau_3527  extracellular solute-binding protein family 1  28.65 
 
 
436 aa  95.1  2e-18  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_2709  glycerol-3-phosphate transporter periplasmic binding protein  25.68 
 
 
441 aa  94.4  3e-18  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_1092  extracellular solute-binding protein family 1  26.96 
 
 
438 aa  94.7  3e-18  Ralstonia pickettii 12J  Bacteria  normal  0.0503452  normal 
 
 
-
 
NC_013205  Aaci_0075  extracellular solute-binding protein family 1  24.62 
 
 
441 aa  94  4e-18  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0829  extracellular solute-binding protein family 1  25.06 
 
 
504 aa  93.6  6e-18  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008043  TM1040_3216  extracellular solute-binding protein  24.09 
 
 
425 aa  93.6  7e-18  Ruegeria sp. TM1040  Bacteria  normal  normal  0.949389 
 
 
-
 
NC_007973  Rmet_2055  extracellular solute-binding protein  26.54 
 
 
436 aa  92.8  9e-18  Cupriavidus metallidurans CH34  Bacteria  normal  0.822621  normal 
 
 
-
 
NC_013411  GYMC61_2845  extracellular solute-binding protein family 1  24.83 
 
 
439 aa  92.8  1e-17  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012917  PC1_0125  glycerol-3-phosphate transporter periplasmic binding protein  25.9 
 
 
444 aa  92.4  1e-17  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_3895  extracellular solute-binding protein  27.65 
 
 
411 aa  92.4  1e-17  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_0770  extracellular solute-binding protein family 1  23.96 
 
 
444 aa  92  2e-17  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_18880  carbohydrate-binding protein  26.76 
 
 
460 aa  91.3  3e-17  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.141989  normal  0.173455 
 
 
-
 
NC_011992  Dtpsy_2659  extracellular solute-binding protein family 1  25.91 
 
 
431 aa  91.3  3e-17  Acidovorax ebreus TPSY  Bacteria  decreased coverage  0.00136924  n/a   
 
 
-
 
NC_008782  Ajs_3306  extracellular solute-binding protein  26.15 
 
 
431 aa  91.3  3e-17  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0648  extracellular solute-binding protein family 1  25.58 
 
 
447 aa  91.3  3e-17  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_3856  glycerol-3-phosphate transporter periplasmic binding protein  25.17 
 
 
440 aa  90.9  4e-17  Enterobacter sp. 638  Bacteria  normal  normal  0.64819 
 
 
-
 
NC_010003  Pmob_0954  extracellular solute-binding protein  21.76 
 
 
399 aa  90.1  6e-17  Petrotoga mobilis SJ95  Bacteria  normal  0.0450213  n/a   
 
 
-
 
NC_010002  Daci_5306  extracellular solute-binding protein  25.78 
 
 
431 aa  90.1  7e-17  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.457023 
 
 
-
 
NC_012669  Bcav_0894  extracellular solute-binding protein family 1  27.27 
 
 
470 aa  89.7  8e-17  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.444762  normal  0.144357 
 
 
-
 
NC_009832  Spro_0234  glycerol-3-phosphate transporter periplasmic binding protein  25.84 
 
 
439 aa  89  1e-16  Serratia proteamaculans 568  Bacteria  normal  normal  0.500336 
 
 
-
 
NC_011831  Cagg_2195  extracellular solute-binding protein family 1  26.47 
 
 
450 aa  89  1e-16  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_014213  Mesil_3226  Transcriptional regulator  26.54 
 
 
410 aa  88.6  2e-16  Meiothermus silvanus DSM 9946  Bacteria  normal  0.101031  normal 
 
 
-
 
NC_014213  Mesil_3422  ABC-type sugar transport systems permease component  26.54 
 
 
410 aa  88.6  2e-16  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA0748  sugar ABC transporter, periplasmic sugar-binding protein, putative  26.76 
 
 
411 aa  87.8  4e-16  Brucella suis 1330  Bacteria  normal  0.537127  n/a   
 
 
-
 
NC_011899  Hore_20630  extracellular solute-binding protein family 1  25.06 
 
 
414 aa  87.4  4e-16  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0698  putative sugar ABC transporter, periplasmic sugar-binding protein  27.3 
 
 
366 aa  87  6e-16  Brucella ovis ATCC 25840  Bacteria  normal  0.436581  n/a   
 
 
-
 
NC_006274  BCZK0482  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  25 
 
 
458 aa  86.3  0.000000000000001  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0625  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  25 
 
 
458 aa  85.5  0.000000000000001  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_013172  Bfae_30840  ABC-type sugar transport system, periplasmic component  24.3 
 
 
463 aa  85.9  0.000000000000001  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0632  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein, putative  25 
 
 
458 aa  85.1  0.000000000000002  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0538  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  25 
 
 
458 aa  85.1  0.000000000000002  Bacillus anthracis str. Sterne  Bacteria  normal  0.406699  n/a   
 
 
-
 
NC_005957  BT9727_0480  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  25.37 
 
 
458 aa  85.1  0.000000000000002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0569  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  25 
 
 
458 aa  85.1  0.000000000000002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0606  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  25 
 
 
458 aa  84.7  0.000000000000003  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>