More than 300 homologs were found in PanDaTox collection
for query gene Gobs_2485 on replicon NC_013757
Organism: Geodermatophilus obscurus DSM 43160



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013757  Gobs_2485  transcriptional regulator, LuxR family  100 
 
 
316 aa  624  1e-178  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_3947  transcriptional regulator, LuxR family  68.75 
 
 
250 aa  82  0.00000000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  0.657672  n/a   
 
 
-
 
NC_013131  Caci_7175  transcriptional regulator, LuxR family  57.58 
 
 
262 aa  73.6  0.000000000005  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.267519  normal 
 
 
-
 
NC_009565  TBFG_12510  LuxR family transcriptional regulator  40.2 
 
 
1137 aa  63.5  0.000000004  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.00000000000000380393  normal 
 
 
-
 
NC_009565  TBFG_10391  LuxR family transcriptional regulator  41.41 
 
 
1085 aa  61.6  0.00000002  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000000074536  normal 
 
 
-
 
NC_013946  Mrub_0655  two component LuxR family transcriptional regulator  50 
 
 
194 aa  61.2  0.00000002  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_38740  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  40.86 
 
 
250 aa  61.2  0.00000002  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_4301  transcriptional regulator, LuxR family  54.55 
 
 
261 aa  61.2  0.00000002  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_10909  LuxR family transcriptional regulator  41.41 
 
 
882 aa  60.5  0.00000003  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_2294  transcriptional regulator, LuxR family  36.84 
 
 
253 aa  60.1  0.00000005  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_2946  LuxR family transcriptional regulator  55.74 
 
 
781 aa  60.1  0.00000005  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_2943  two component LuxR family transcriptional regulator  54.69 
 
 
215 aa  59.3  0.00000009  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A2179  LuxR family transcriptional regulator  34.9 
 
 
239 aa  58.9  0.0000001  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_3337  two component transcriptional regulator, LuxR family  50.65 
 
 
254 aa  58.9  0.0000001  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0952095  normal  0.130531 
 
 
-
 
NC_008781  Pnap_3341  response regulator receiver protein  41.07 
 
 
275 aa  58.5  0.0000001  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0108642  normal 
 
 
-
 
NC_007951  Bxe_A3567  ATP-dependent transcription regulator LuxR  53.23 
 
 
251 aa  58.2  0.0000002  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_4222  ATP-dependent transcription regulator LuxR  48.39 
 
 
309 aa  58.2  0.0000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.157864 
 
 
-
 
NC_008740  Maqu_0164  response regulator receiver protein  46.77 
 
 
128 aa  57.8  0.0000002  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_1536  LuxR family transcriptional regulator  43.59 
 
 
357 aa  57.4  0.0000003  Frankia sp. CcI3  Bacteria  normal  0.413488  normal 
 
 
-
 
NC_009523  RoseRS_4275  two component LuxR family transcriptional regulator  50.79 
 
 
226 aa  57.8  0.0000003  Roseiflexus sp. RS-1  Bacteria  normal  0.798613  normal  0.287125 
 
 
-
 
NC_014212  Mesil_2373  two component transcriptional regulator, LuxR family  52.46 
 
 
192 aa  57  0.0000004  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0175  two component transcriptional regulator, LuxR family  51.56 
 
 
222 aa  57  0.0000005  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_1995  ATP-dependent transcription regulator LuxR  31.07 
 
 
1019 aa  56.2  0.0000006  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.686742  n/a   
 
 
-
 
NC_009767  Rcas_1355  two component LuxR family transcriptional regulator  54.1 
 
 
230 aa  56.6  0.0000006  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_0301  two component LuxR family transcriptional regulator  38.14 
 
 
231 aa  56.2  0.0000007  Anabaena variabilis ATCC 29413  Bacteria  normal  0.54347  normal 
 
 
-
 
NC_013525  Tter_0530  transcriptional regulator, LuxR family  42.62 
 
 
217 aa  56.2  0.0000007  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009253  Dred_0925  response regulator receiver protein  46.15 
 
 
119 aa  55.8  0.0000008  Desulfotomaculum reducens MI-1  Bacteria  normal  0.592282  n/a   
 
 
-
 
NC_013739  Cwoe_0618  transcriptional regulator, LuxR family  50 
 
 
196 aa  55.8  0.0000009  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0253  two component transcriptional regulator, LuxR family  52.46 
 
 
218 aa  55.8  0.0000009  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.649746 
 
 
-
 
NC_004578  PSPTO_4080  DNA-binding response regulator, LuxR family  51.72 
 
 
222 aa  55.8  0.000001  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.542388  n/a   
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  47.14 
 
 
225 aa  55.5  0.000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_007974  Rmet_5165  two component LuxR family transcriptional regulator  48.39 
 
 
231 aa  55.5  0.000001  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.162111 
 
 
-
 
NC_008025  Dgeo_1626  two component LuxR family transcriptional regulator  53.23 
 
 
194 aa  55.8  0.000001  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.947018 
 
 
-
 
NC_008061  Bcen_3643  LuxR family transcriptional regulator  31.39 
 
 
239 aa  55.5  0.000001  Burkholderia cenocepacia AU 1054  Bacteria  hitchhiker  0.00106494  n/a   
 
 
-
 
NC_008148  Rxyl_2511  two component LuxR family transcriptional regulator  50 
 
 
229 aa  55.1  0.000001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_4724  LuxR family transcriptional regulator  31.39 
 
 
239 aa  55.5  0.000001  Burkholderia cenocepacia HI2424  Bacteria  hitchhiker  0.000522863  hitchhiker  0.00659366 
 
 
-
 
NC_011004  Rpal_1441  two component transcriptional regulator, LuxR family  49.28 
 
 
308 aa  55.5  0.000001  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0671  two component LuxR family transcriptional regulator  50.82 
 
 
333 aa  55.8  0.000001  Methylibium petroleiphilum PM1  Bacteria  normal  0.0205263  normal 
 
 
-
 
NC_010515  Bcenmc03_5576  LuxR family transcriptional regulator  31.39 
 
 
239 aa  55.5  0.000001  Burkholderia cenocepacia MC0-3  Bacteria  hitchhiker  0.000012464  normal  0.015154 
 
 
-
 
NC_007333  Tfu_1817  LuxR response regulator receiver  50.72 
 
 
236 aa  54.7  0.000002  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_21820  two component transcriptional regulator, LuxR family  37.97 
 
 
211 aa  54.7  0.000002  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  49.02 
 
 
213 aa  55.1  0.000002  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  46.03 
 
 
227 aa  54.7  0.000002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_014210  Ndas_2190  two component transcriptional regulator, LuxR family  49.18 
 
 
218 aa  55.1  0.000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000643495  hitchhiker  0.000215707 
 
 
-
 
NC_013739  Cwoe_1523  ATP-dependent transcriptional regulator, MalT- like, LuxR family  50.82 
 
 
873 aa  55.1  0.000002  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_0994  response regulator receiver domain-containing protein  44.07 
 
 
221 aa  55.1  0.000002  Saccharophagus degradans 2-40  Bacteria  normal  0.16925  normal 
 
 
-
 
NC_013235  Namu_5237  ATP-dependent transcriptional regulator, MalT- like, LuxR family  49.25 
 
 
846 aa  55.1  0.000002  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  47.54 
 
 
224 aa  55.1  0.000002  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008463  PA14_13150  putative transcriptional regulator  43.33 
 
 
906 aa  54.7  0.000002  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.697366  normal 
 
 
-
 
NC_008699  Noca_1438  response regulator receiver  34 
 
 
213 aa  54.7  0.000002  Nocardioides sp. JS614  Bacteria  normal  0.494689  n/a   
 
 
-
 
NC_008699  Noca_3120  response regulator receiver  49.21 
 
 
212 aa  54.7  0.000002  Nocardioides sp. JS614  Bacteria  normal  0.230577  n/a   
 
 
-
 
NC_013131  Caci_4471  transcriptional regulator, LuxR family  45.45 
 
 
680 aa  55.1  0.000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.129361 
 
 
-
 
NC_008740  Maqu_1584  regulatory protein, LuxR  44.62 
 
 
916 aa  54.3  0.000002  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_6962  two component transcriptional regulator, LuxR family  46.27 
 
 
234 aa  55.1  0.000002  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  51.67 
 
 
227 aa  53.9  0.000003  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_009380  Strop_3279  response regulator receiver  42.86 
 
 
221 aa  54.3  0.000003  Salinispora tropica CNB-440  Bacteria  normal  0.97215  normal 
 
 
-
 
NC_012669  Bcav_2482  two component transcriptional regulator, LuxR family  50 
 
 
208 aa  54.3  0.000003  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0211915  normal  0.642006 
 
 
-
 
NC_007974  Rmet_5646  putative LuxR family transcriptional regulator  44.58 
 
 
231 aa  54.3  0.000003  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.387707 
 
 
-
 
NC_013739  Cwoe_4163  two component transcriptional regulator, LuxR family  50.82 
 
 
208 aa  53.9  0.000003  Conexibacter woesei DSM 14684  Bacteria  normal  0.296115  normal  0.698078 
 
 
-
 
NC_009953  Sare_3511  two component LuxR family transcriptional regulator  42.86 
 
 
221 aa  54.3  0.000003  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0444635 
 
 
-
 
NC_008726  Mvan_1929  regulatory protein, LuxR  50 
 
 
862 aa  53.9  0.000003  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_2836  two component LuxR family transcriptional regulator  40.43 
 
 
207 aa  54.3  0.000003  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.644859  normal 
 
 
-
 
NC_013947  Snas_4871  two component transcriptional regulator, LuxR family  40 
 
 
222 aa  54.3  0.000003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.134443  normal  0.31614 
 
 
-
 
NC_014212  Mesil_1051  two component transcriptional regulator, LuxR family  47.54 
 
 
211 aa  53.9  0.000004  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.0337978 
 
 
-
 
NC_009667  Oant_0198  autoinducer-binding domain-containing protein  30.11 
 
 
235 aa  53.5  0.000004  Ochrobactrum anthropi ATCC 49188  Bacteria  decreased coverage  0.00000129067  n/a   
 
 
-
 
NC_009656  PSPA7_1186  transcriptional regulator  48.44 
 
 
906 aa  53.9  0.000004  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_3490  LuxR family transcriptional regulator  52.94 
 
 
950 aa  53.9  0.000004  Frankia sp. EAN1pec  Bacteria  normal  0.123756  normal  0.368778 
 
 
-
 
NC_013947  Snas_2579  two component transcriptional regulator, LuxR family  49.18 
 
 
213 aa  53.9  0.000004  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.0500394 
 
 
-
 
NC_012791  Vapar_3838  transcriptional regulator, LuxR family  55.93 
 
 
161 aa  53.9  0.000004  Variovorax paradoxus S110  Bacteria  normal  0.696628  n/a   
 
 
-
 
NC_013235  Namu_5188  ATP-dependent transcriptional regulator, MalT- like, LuxR family  52.46 
 
 
884 aa  53.1  0.000005  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4706  ATP-dependent transcription regulator LuxR  44.44 
 
 
911 aa  53.5  0.000005  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.157543 
 
 
-
 
NC_007511  Bcep18194_B1052  LuxR family transcriptional regulator  30.66 
 
 
239 aa  53.1  0.000005  Burkholderia sp. 383  Bacteria  hitchhiker  0.00000000445716  normal  0.182523 
 
 
-
 
NC_014211  Ndas_4922  two component transcriptional regulator, LuxR family  46.88 
 
 
206 aa  53.1  0.000005  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0302523  normal 
 
 
-
 
NC_013739  Cwoe_4386  two component transcriptional regulator, LuxR family  47.54 
 
 
214 aa  53.1  0.000005  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_4194  LuxR family GAF modulated transcriptional regulator  47.54 
 
 
285 aa  53.1  0.000005  Frankia sp. EAN1pec  Bacteria  normal  0.0104113  normal 
 
 
-
 
NC_008688  Pden_4740  two component LuxR family transcriptional regulator  42.86 
 
 
160 aa  53.1  0.000005  Paracoccus denitrificans PD1222  Bacteria  normal  0.318753  normal  0.272493 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  44.44 
 
 
226 aa  53.5  0.000005  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013093  Amir_6539  two component transcriptional regulator, LuxR family  42.67 
 
 
198 aa  53.5  0.000005  Actinosynnema mirum DSM 43827  Bacteria  normal  0.370011  n/a   
 
 
-
 
NC_013530  Xcel_3197  transcriptional regulator, LuxR family  51.85 
 
 
876 aa  53.1  0.000005  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_2079  two component transcriptional regulator, LuxR family  43.94 
 
 
212 aa  53.1  0.000006  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  47.62 
 
 
221 aa  53.1  0.000006  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_007778  RPB_1250  two component LuxR family transcriptional regulator  46.38 
 
 
309 aa  53.1  0.000006  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.886948  normal 
 
 
-
 
NC_009338  Mflv_3579  two component LuxR family transcriptional regulator  40.43 
 
 
217 aa  53.1  0.000006  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.393396  normal  0.0540104 
 
 
-
 
NC_013169  Ksed_04030  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  46.77 
 
 
223 aa  53.1  0.000006  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.253855  normal  0.0592312 
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  47.22 
 
 
230 aa  53.1  0.000006  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_1445  two component LuxR family transcriptional regulator  48.28 
 
 
308 aa  52.8  0.000007  Dechloromonas aromatica RCB  Bacteria  normal  0.446624  normal 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  48.33 
 
 
220 aa  53.1  0.000007  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013889  TK90_1248  transcriptional regulator, LuxR family  38.55 
 
 
232 aa  52.8  0.000007  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_2987  LuxR family two component transcriptional regulator  45.31 
 
 
231 aa  52.8  0.000007  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_0346  two component transcriptional regulator, LuxR family  54.1 
 
 
210 aa  52.8  0.000007  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0205277  normal  0.823307 
 
 
-
 
NC_013235  Namu_0423  ATP-dependent transcriptional regulator, MalT- like, LuxR family  49.25 
 
 
1003 aa  52.8  0.000008  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_010644  Emin_1197  two component LuxR family transcriptional regulator  41.94 
 
 
225 aa  52.8  0.000008  Elusimicrobium minutum Pei191  Bacteria  normal  normal  0.0485473 
 
 
-
 
NC_013159  Svir_04700  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  43.24 
 
 
198 aa  52.8  0.000008  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.162406  normal 
 
 
-
 
NC_008709  Ping_2984  two component transcriptional regulator, LuxR family protein  40 
 
 
295 aa  52.8  0.000008  Psychromonas ingrahamii 37  Bacteria  normal  0.43543  normal  0.546259 
 
 
-
 
NC_013131  Caci_3634  transcriptional regulator, LuxR family  49.18 
 
 
525 aa  52.8  0.000008  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.567744  normal  0.0299379 
 
 
-
 
NC_013521  Sked_29510  ATP-dependent transcriptional regulator  45.16 
 
 
992 aa  52.8  0.000008  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.611914 
 
 
-
 
NC_008781  Pnap_1851  two component LuxR family transcriptional regulator  43.55 
 
 
262 aa  52.8  0.000008  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.467917  normal  0.53175 
 
 
-
 
NC_004578  PSPTO_1151  transcriptional regulator, LuxR family  43.84 
 
 
910 aa  52.4  0.000009  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  45.9 
 
 
224 aa  52.8  0.000009  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_009485  BBta_0652  two component LuxR family transcriptional regulator  47.54 
 
 
305 aa  52  0.00001  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0800453  normal  0.813173 
 
 
-
 
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