| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5646 |
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| Symbol | |
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| ID | 4042510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 2407831 |
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| End bp | 2408526 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637981065 |
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| Product | putative LuxR family transcriptional regulator |
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| Protein accession | YP_587774 |
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| Protein GI | 94314565 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.387707 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGGGCAA CGGTGGTCGA ATTTCGCCCG CTGGTCGGGC TTGGCATCCA GCGGATTCTC
AATCGTATTG CAGACGTGGA CGACAGCAGC GTCATCACGC CACGGCCAGA GACCCCGTGT
TCTCTGCACG GTACCGAGTT ACTGGTACTT GGCGCCTTGC CGCGCGGCGC CAATATCGAC
ATGCACCAGT TGCTGGAAAC CGCATCGGCC GTGCGCTGCG TGCTGTTCCT GGCGCATGGC
GGCGAAGTCC AATGGATGCC GCCCAACCCG TTCGCGCCGC TATTGTCGTG GCTGCCCGAA
CACGCGAGCG CCGTTGAGAT CGAATGTGCG CTACGCGCCT TGATCGCCTG CGCGCATGCC
GGAATTCACG CGCTGGCGCC AGCGCTGCCG ATTGCGCCGG CTACCCCGAT TGCCGTGCCA
ACGCCGGTAG GCGTCCACGG CAGCACGCGG GTGCCGGCAT ACATTTGCGA AGCGCGGCTG
CTCAGGCTGA CCCTGCGCCA GTACGAGGTG CTCGTACTGC TGTCGCGGGG ACTCTCGGTG
AAGTCCATCA GCAGGCAACT ACGTATCTCC GTCCCGACCG TGAAAAGCCA TACGTTGCAG
CTCTATCGGC GACTCGCAGC CAAGAACAAG TCGGAGGCGG TCTTCATGGC GCGCGCGAAG
GGCGCCGCAC TGGCAACCGT CTCGTCCGAT CCATGA
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| Protein sequence | MRATVVEFRP LVGLGIQRIL NRIADVDDSS VITPRPETPC SLHGTELLVL GALPRGANID
MHQLLETASA VRCVLFLAHG GEVQWMPPNP FAPLLSWLPE HASAVEIECA LRALIACAHA
GIHALAPALP IAPATPIAVP TPVGVHGSTR VPAYICEARL LRLTLRQYEV LVLLSRGLSV
KSISRQLRIS VPTVKSHTLQ LYRRLAAKNK SEAVFMARAK GAALATVSSD P
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