| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2946 |
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| Symbol | |
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| ID | 4115941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 2954200 |
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| End bp | 2956545 |
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| Gene Length | 2346 bp |
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| Protein Length | 781 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 638037716 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_645668 |
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| Protein GI | 108805731 |
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| COG category | [R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG3903] Predicted ATPase
[COG4566] Response regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGGAGCG GCGGGGGGCA GGCGGAGGCT CCGCGGGCGC CCCGGGGCAA CCTGCCCGCC
GAGACCTCCA GCTTCGTCGG GCGCGAACGG GAGCTCTCGG AGGTGAGGGC GCTGCTCGCC
GGCACGCGGC TGCTCACGCT CACCGGTCCG GGGGGATGCG GCAAGACGCG GCTCGCGCTG
CGGGCGGCGC GGGAGGCTGC GGGGGGCTTC GGGGGCGCCT GGTGGGTGGA GCTGGCCTCG
CTCTCGGACC CCGGGCTGGT GGAGCAGGCG GTGGCCGGGG CGTTGGGCGT GCGCGAGGCG
CCGGGGCGCT CGCTGGTCGG GGCGTGCGCC GAGCGTCTGG GGTCCGGGGG CGCGCTCCTC
GTGCTGGACA ACTGCGAGCA CCTGGTCGGG GCGTGCGCCG CGCTGGCCGA GGCCCTGCTG
CGCGCCTGCC CGGACCTGAA GGTCCTTGCG ACCAGCCGCG AGGCGCTCGG CGTCGCCGGG
GAGACCGTCT GGCCCGTGCC TGCGCTCTCC CTGCCCCCGC CCGAGGAGGC GGCGGACCCC
GGGGCGCTGG CGCGCTACGA GGCCACCCGC CTGTTTCTGG AGCGGGCAGC GGCGGCGGCC
CCGGGCTTCG GGCTGACGGA GCGGAGCGCG GCCGAGGTCT CGCGGGTGTG CCGCCGGCTC
GACGGCATCC CGCTGGCCAT AGAGCTCGCG GCGGCCAGGA CGAGGGTGCT CTCGGTGGGC
CAGATCGCTG AGCGGCTCGA GGGCGCTCTG CGGCTCCTGA CGGGCGGGAG CCGGACGGCC
TCGCCGCGCC AGAGGACCCT GAGGGCGACG ATGGACTGGA GCTACGGGCT GCTCCCGGAG
GGCGAGCGGG CGCTGTTCCG CCGGCTCGCC GCCTTCTCCG GCGGGTTCAC GCTGGAGGCG
GCGGAGGAGG TCTGCTCGGG GGAGGGCATC GAGCGGGGCG AGGTGCTGGA CCTGCTCTCG
CGACTTGTGG ACAAGTCGCT CGTGGTGGTG GACCGGCGGG GCGGCGAGCC CCGGTACGGG
CTGCTCGAGA CGGTGCGGCA GTACGGCCGG GAGAGGCTCG AGGAGTCGGG GGAGGGGGCG
GCGGTGGCGA TGCGCCACGC CCGCTGCTTC CTGCGGCTCG CGGAGGAGGC CGGGCGCGGC
ATGCTCGGCC CCCGCCAGAC GGCGTGGCTC GGGCGCCTCG AGCGCGAGCA CGCCAACCTC
AGGGCGGCGC TGGCGTGGTT CCGGGAGGAG GGGGAGGCGG AGCGGGGCCT CGGGATGGCG
GCGGCGCTGG TGCGCTTCTG GTGGTACCGG GGCTACTACA GCGAGGGGCG GGCGTGGCTC
GAGGGGTTCC TGGAGCTTCC GGGGGCGCGG GAGGCGGGCG CGGTCAGGGC GCGGGCGCTC
CACGCCCTCG GGGCGCTCAT CTACCGGAGC GCCGACTGGG CCGGGGGAGA CGCGGAGGTG
GTGCGCTCGC GCCTGGAGGA GAGCCTGGAG ATCTATCGGG GCCTCCCGGG GGAGGAGCCG
CGCGTCGCCG CCGTCCTCAG GGACCTCGGG CGCCTGAGCG CGCAGACGGG CGACCGGGAG
ACGGCCCGCT CCTTCCTGGA GGAGAGCCTC CGGCTCGACC AGCGCTCCGG CAACGAGCAC
GGCCTGGCCC TCTCGCGCAG CTACCTGGGC CTCCTGTATC TCCTCGGGGG CGATCTGGAG
GCGGCGCGCG AGCACCTCGA GGCCGGCCTG GAGGCGCTGC GGAGGGTGGG GGACCCGGAG
GAGGTCCGGA CCTGCCTGTG GTTTCTCATA ATGCTCGCCT GCGAGCGGGG CGATGCCGCC
GCCGCCCGCG CCCACGCCGC CCGGATGGTG GAGGGGGCCT CCCTGCTGCA GTACCGCTAC
GCCGCCCCGC TGGTGCTGCA CGCCTACGCG CGCCTGGCGG TGGAGGAGGG GCGTCCGGCG
CGCGCCCTCC GGCTGGCGGG CGCGGCGGAC CGGCTGGGGA GGAGCATCGG CACGTCGGTG
GGGCCGGCCC TGCGGGACTT CCTGCGGCGC GGGCTGGAGC CGGCCTGGGC GGCGCTCGGC
GAGGAGAGGG GGAGGGCGGC CTTCGAGGCG GGCCGGGCCC TGAGCCTGCG GGAGGCCGCC
GCCTACGCCC TCGAAGAGGG CCCTCGCGGG GAGGAGCGGG GGCCCGCCGG AGCGCCCCTG
ACCCCGCGGG AGCTCGAGGT CTTGCGGCTC GTCGGCGAGG GGATGACCGA CGCCCAGGTG
GCCGGGCGGC TGTTCGTCAG CACCCGGACC GTGAACGCGC ACCTGCGCTC CATCCTGCGC
AAGCTGGGCG TGCGCTCGCG CGCCGCGGCG GTGCGGCTCG CCCAGGAGCG CGGCCTCCTC
GGCTAG
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| Protein sequence | MGSGGGQAEA PRAPRGNLPA ETSSFVGRER ELSEVRALLA GTRLLTLTGP GGCGKTRLAL
RAAREAAGGF GGAWWVELAS LSDPGLVEQA VAGALGVREA PGRSLVGACA ERLGSGGALL
VLDNCEHLVG ACAALAEALL RACPDLKVLA TSREALGVAG ETVWPVPALS LPPPEEAADP
GALARYEATR LFLERAAAAA PGFGLTERSA AEVSRVCRRL DGIPLAIELA AARTRVLSVG
QIAERLEGAL RLLTGGSRTA SPRQRTLRAT MDWSYGLLPE GERALFRRLA AFSGGFTLEA
AEEVCSGEGI ERGEVLDLLS RLVDKSLVVV DRRGGEPRYG LLETVRQYGR ERLEESGEGA
AVAMRHARCF LRLAEEAGRG MLGPRQTAWL GRLEREHANL RAALAWFREE GEAERGLGMA
AALVRFWWYR GYYSEGRAWL EGFLELPGAR EAGAVRARAL HALGALIYRS ADWAGGDAEV
VRSRLEESLE IYRGLPGEEP RVAAVLRDLG RLSAQTGDRE TARSFLEESL RLDQRSGNEH
GLALSRSYLG LLYLLGGDLE AAREHLEAGL EALRRVGDPE EVRTCLWFLI MLACERGDAA
AARAHAARMV EGASLLQYRY AAPLVLHAYA RLAVEEGRPA RALRLAGAAD RLGRSIGTSV
GPALRDFLRR GLEPAWAALG EERGRAAFEA GRALSLREAA AYALEEGPRG EERGPAGAPL
TPRELEVLRL VGEGMTDAQV AGRLFVSTRT VNAHLRSILR KLGVRSRAAA VRLAQERGLL
G
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