| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_29510 |
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| Symbol | |
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| ID | 8634585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | - |
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| Start bp | 3285423 |
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| End bp | 3288401 |
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| Gene Length | 2979 bp |
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| Protein Length | 992 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | |
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| Product | ATP-dependent transcriptional regulator |
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| Protein accession | YP_003315687 |
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| Protein GI | 269796232 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.611914 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGGAG ACTCGGAGAG GCACGCCGGA GCGCGCGACG GCGCGCGCCC CGCCCGGCTG
CCCCGCGCGC CCTCGGTCCT CGTCGCCAAG CCGACGCTCA CCGCCCTGCT CGACCGCCAC
GAGCCGCTCA CGGTGCTGCG GGCCCCCAAG GGGTACGGGA AGACCGCGCT CGTCAGCGGG
TGGGCCAGGG GCCGCGCCGC GCACGTCGAC CTGGTGTGGG TGTCGTGCCG TCTCCCGTCG
GTGCTCTCCG ACGGCATGCC CGCTCCGTTC TGGGCACGGC TGGCCGACGA GATGTGGCGT
TCCGGTCTCG GCGTGGTCGA GCCGGGGCTC GCCCCTGGCC GCAGCGACGT GGTCGCCGCG
CTGGCCGGGC GCTCCGACCC GCTGTGCGTG GTGGTCGACG ACTTCGACGA CAACACCGAC
CCGCACGTGG CCGGCGAGCT GCTCGACCTC GTGAGCCGTT TCGACACCCT CGACGTCGTC
GTCCTGGCAC GGTCGCCCCG CACGGCCGAC GCGCTCCTGG CGTCGACGGT GGACTCGGTC
GAGCTGGGAC CCCAGGACCT CCTGCTGAGC GTGGACGACG CCGCCGGGCT CGTCTCCGCG
CTGGGGCACG AGCTCACACC CGACCAGGTG CACCGGCTGG TCCGGGACAC CGGTGGCTGG
CCGGCGCTGC TGCGGGCCGT GCTGGCGGGC TCTGTCTCTG CGTCGCGCAC CGAGGGACGG
GTGAGGTCCG CCGCGCTCGG GGCAGCGGCG GACGACCTGC AGGCTGCGGT GACCGGCGGG
TTCTCGGGGC GCCTACCCCC GGCTGCTCCC GGCGCCGCAG CGCTCCCTGG TCTGGTCTTC
CCCGCACAGA CGACAGGCGG CCCTCCCGCC CGGCGCCCGT CGTCACGCAG CCCGTCCTCC
CGCAGCCCGT CGTCGAGAGA CCTGCCCCCC GGTGGGCCGT CGCCCGCCCG CACCTCGCCT
GCCGGTCCTG GAGCGCGCGT CGACCGGGCG GTGCTGCACT CGGTGGTCTC TCCCGTGGCG
GAGGTCACCG TCGACCTCAC CGCAGGCTTC GCGTACCTCC GGGCGGTCTG GGACGAGCTC
GACGACCAGG GGATGCGGCG GTTCGTCCAG CACACCGGGC TGCTGGGCGC GTTCACGGTG
GACGACGCCG TGGCGAGCAG CGGCCTGCGC GACTCGGCCC GGCACGTGGG CGCGCTCCTC
GACCTCGGGC TCCTCGTCCA GGACACGGAC GAGGACGACG CCCGGTTCCG CTACGTCGAG
GCGGTGCGGC TCGCGGCCGC AGAGATCTTC CGGTCTGAGG AGCCGCGGCG GTTCCGGGTC
GCGCAGCGTC GTCTCGCCCG CCTGCGGACG TCCCAGGGGC GGGTCGACGA GGCGGTGGGC
CACCTCCTGG CCGCACGGAC GTGGGAGGCC TGCGCCGAGC TCGTCGACCT GCACTGGGCG
ACACTCGTGG CCGAGCGCCC CGAGGTGGTC GCCGACGTGG TGGAGACCGT CCCCGAGGAG
GTGCTGGCCC GGCACCCGCG CCTCGGCGTG GCGCGCGCCC ACCTCCTGCC GGTCCTGAGG
CCGCAACGGC GCCGGACGTC CGGCTCGGGC GCGCCGGTCG ACGGTGCTCT CCACGACGTC
GGTCCGCGCG CCACCCACCC CGAGGAGGGC TTGGCCCAGG TGCTCGGCTC GATGGAGGAG
GGGCTGGGGC AGATCGTCAC GCTGCGCCTG ACGGGTGACT TCGGCGCGGC GACCACCCTG
GCCGAGCGTG CGCAGGACGG GCTCGGGCCG CTGCTGGACA CAGCAGACAC CGCAGCGAAG
GGCGAGCTGG CGCCGCTGCT CTACGAGTGG GCCGTGACGC GCCTGCTCGG CGCCGACGTC
GAGGGCGCGC TCGCCGCCTT CCGCCAGGGG GCCGAGCTGG CGCGCAGCGT CGACCGGCCG
GTCGTGCTCC GTGAGGCAGC GGTCGGTGCC GCCCTGTGCT GCGCGCTCCT GGGGTACCTC
GAGCAGGCGG AGGAGTGGTT GCTCGAGGTG CCGCCCGGTG TACCCGTCGA GGACGCCCCG
ATCCAGGAGG GGCGCGGGGT GCGCACGGTG CGGTCCATCG TGGCGCTCGA GCGGTTCGAG
CCGGCCGGTC CGGAGCAGAC GGTGCTGCTG GGCGACCTGG GCGCGGCGTC GGGGCTGGGG
GTGGTGGTCG TCGCGGTCCG GGCGCAGGCC GCCCTGCGTG ACGGTACGCA CTACGAGGTG
CTCGCCGAGG TCGAGGAGGC GCGGGAGCAC CTCCAGGGCA CCACGGCGAC CAAGAGCCTC
CGGGAGGCTC TCCTGGCGGG CGCCGCGGTC GACCTGTACC TGGGCCTCGG GTACGTGTCG
AAGGCGCGGG CCGCCGTCGC GGGCATCGAC CACGGCTACG AGGTGGTCGG GCTGGCCTGC
GCCCGGACGG ACCTCGTGGC GGGGGACCTG GAGGACGCCG TGACGCGGGC CTCTGCGCTG
CTGGCGACGC GCGTGGCCGG TCCGCGCCTG CGGCTGGACC TCCTGCTGGT CCTGGCGGCG
GCGCAGGCGG GGCTCGGGCA CCGGCACGAG GCGGCGGTCG CGCTCGAGGA GGCCACGTCG
ATCTGCCGGG CGACCGGTCT GCTGCGGAGC TTTCTCAAGG TCCCGAGGGA GGTGCTCGAG
GACCTCGCGC CGCTGGTACC GGGGGTCCGG GCCGTGCTGG AGGCCCCGGG GTTCGCCGAG
GCCGTCGGGG TGTTCCCGAG CGAGCCGCCG CGCGCGCGGC TGAGCAGCCG TGAGCTGCAG
GTGCTGCGGA GCCTGGCCGA GAGCCCCTCG CTCGCGAGCG TCGCACGGTC GCTCTTCCTG
TCGTCCAACA CCGTCAAGAC GCACCTGCGC AGCATCTACC AGAAGCTCGG GACCCACTCG
AGCGTCGAGA CCGTCGAGAA GGCGCGCGAC CTCGGCCTGC TCGACGACGA CGTCGCCGTC
GAGGGAGAGG GCGACGAGCG CGACGGCGGC GAGCGCTGA
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| Protein sequence | MSGDSERHAG ARDGARPARL PRAPSVLVAK PTLTALLDRH EPLTVLRAPK GYGKTALVSG
WARGRAAHVD LVWVSCRLPS VLSDGMPAPF WARLADEMWR SGLGVVEPGL APGRSDVVAA
LAGRSDPLCV VVDDFDDNTD PHVAGELLDL VSRFDTLDVV VLARSPRTAD ALLASTVDSV
ELGPQDLLLS VDDAAGLVSA LGHELTPDQV HRLVRDTGGW PALLRAVLAG SVSASRTEGR
VRSAALGAAA DDLQAAVTGG FSGRLPPAAP GAAALPGLVF PAQTTGGPPA RRPSSRSPSS
RSPSSRDLPP GGPSPARTSP AGPGARVDRA VLHSVVSPVA EVTVDLTAGF AYLRAVWDEL
DDQGMRRFVQ HTGLLGAFTV DDAVASSGLR DSARHVGALL DLGLLVQDTD EDDARFRYVE
AVRLAAAEIF RSEEPRRFRV AQRRLARLRT SQGRVDEAVG HLLAARTWEA CAELVDLHWA
TLVAERPEVV ADVVETVPEE VLARHPRLGV ARAHLLPVLR PQRRRTSGSG APVDGALHDV
GPRATHPEEG LAQVLGSMEE GLGQIVTLRL TGDFGAATTL AERAQDGLGP LLDTADTAAK
GELAPLLYEW AVTRLLGADV EGALAAFRQG AELARSVDRP VVLREAAVGA ALCCALLGYL
EQAEEWLLEV PPGVPVEDAP IQEGRGVRTV RSIVALERFE PAGPEQTVLL GDLGAASGLG
VVVVAVRAQA ALRDGTHYEV LAEVEEAREH LQGTTATKSL REALLAGAAV DLYLGLGYVS
KARAAVAGID HGYEVVGLAC ARTDLVAGDL EDAVTRASAL LATRVAGPRL RLDLLLVLAA
AQAGLGHRHE AAVALEEATS ICRATGLLRS FLKVPREVLE DLAPLVPGVR AVLEAPGFAE
AVGVFPSEPP RARLSSRELQ VLRSLAESPS LASVARSLFL SSNTVKTHLR SIYQKLGTHS
SVETVEKARD LGLLDDDVAV EGEGDERDGG ER
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