Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_5576 |
Symbol | |
ID | 6128384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 2719003 |
End bp | 2719722 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641652664 |
Product | LuxR family transcriptional regulator |
Protein accession | YP_001779191 |
Protein GI | 170737931 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000012464 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.015154 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTGC GCTGGCAGGA TGCCTACCAA CAATTCAGCG CCGCGGAAGA CGAGCAGCAG CTCTTCCAGC GGATCGCCGC CTATTCCAAG CGGCTCGGAT TCGAATACTG CTGTTACGGC ATTCGCGTAC CGCTGCCCGT TTCGAAGCCC GCGGTCGCGA TCTTCAATAC CTATCCGGAC GGCTGGATGG CGCACTACCA GGCGCAGAAC TACATCGAGA TCGACTCGAC GGTTCGCGAC GGCGCGCTCA GCACCAACAT GATCGTCTGG CCGGACGTCG ACCGGATCGA CCCGTGCCCG CTGTGGCAGG ACGCGCGCGA TTTCGGGCTG TCGGTGGGCG TCGCGCAATC GAGCTGGGCG GCGCGCGGCG CATTCGGCCT GTTGAGCATC GCCCGCCATG CCGACCGGCT GACGCCGGCC GAGATCAACA TGCTGACGCT GCAGACCAAC TGGCTCGCGA ACCTGTCGCA TTCGCTGATG AGCCGCTTCA TGGTGCCGAA GCTGTCGCCG GCGGCGGGCG TCACGCTGAC CGCGCGCGAG CGCGAGGTGC TGTGCTGGAC GGCCGAGGGC AAGACCGCGT GCGAAATCGG TCAGATCCTC AGCATCTCGG AGCGCACGGT CAACTTCCAC GTGAACAACA TCCTCGAGAA GCTCGGCGCG ACCAACAAGG TCCAGGCGGT CGTCAAGGCG ATCTCGGCGG GGCTCATCGA AACACCTTGA
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Protein sequence | MELRWQDAYQ QFSAAEDEQQ LFQRIAAYSK RLGFEYCCYG IRVPLPVSKP AVAIFNTYPD GWMAHYQAQN YIEIDSTVRD GALSTNMIVW PDVDRIDPCP LWQDARDFGL SVGVAQSSWA ARGAFGLLSI ARHADRLTPA EINMLTLQTN WLANLSHSLM SRFMVPKLSP AAGVTLTARE REVLCWTAEG KTACEIGQIL SISERTVNFH VNNILEKLGA TNKVQAVVKA ISAGLIETP
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