More than 300 homologs were found in PanDaTox collection
for query gene Dred_0925 on replicon NC_009253
Organism: Desulfotomaculum reducens MI-1



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009253  Dred_0925  response regulator receiver protein  100 
 
 
119 aa  238  1e-62  Desulfotomaculum reducens MI-1  Bacteria  normal  0.592282  n/a   
 
 
-
 
NC_013947  Snas_3745  two component transcriptional regulator, LuxR family  45.28 
 
 
235 aa  82.8  0.000000000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.627677  normal  0.255424 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  60.34 
 
 
213 aa  81.6  0.000000000000003  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_2108  two component LuxR family transcriptional regulator  67.86 
 
 
218 aa  80.1  0.00000000000001  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1863  two component transcriptional regulator, LuxR family  63.33 
 
 
216 aa  79.3  0.00000000000002  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000548978  n/a   
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  55.56 
 
 
215 aa  78.6  0.00000000000003  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5263  DNA-binding response regulator  55.56 
 
 
215 aa  78.2  0.00000000000003  Bacillus anthracis str. Sterne  Bacteria  normal  0.24037  n/a   
 
 
-
 
NC_005957  BT9727_5091  response regulator  55.56 
 
 
215 aa  78.2  0.00000000000003  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK5108  response regulator  55.56 
 
 
215 aa  78.2  0.00000000000003  Bacillus cereus E33L  Bacteria  decreased coverage  0.00235048  n/a   
 
 
-
 
NC_007530  GBAA_5661  DNA-binding response regulator  55.56 
 
 
215 aa  78.2  0.00000000000003  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  55.56 
 
 
215 aa  78.2  0.00000000000003  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5506  DNA-binding response regulator  55.56 
 
 
215 aa  78.2  0.00000000000003  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011886  Achl_3380  two component transcriptional regulator, LuxR family  63.33 
 
 
222 aa  78.6  0.00000000000003  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  63.16 
 
 
216 aa  78.6  0.00000000000003  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5417  DNA-binding response regulator  55.56 
 
 
215 aa  78.2  0.00000000000004  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A5535  DNA-binding response regulator  55.56 
 
 
215 aa  78.2  0.00000000000004  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  49.37 
 
 
208 aa  77.8  0.00000000000004  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  51.35 
 
 
234 aa  77.8  0.00000000000005  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0224272 
 
 
-
 
NC_013235  Namu_5018  two component transcriptional regulator, LuxR family  44.32 
 
 
209 aa  77.8  0.00000000000005  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_5205  two component LuxR family transcriptional regulator  54.93 
 
 
215 aa  77.4  0.00000000000006  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET0663  LuxR family DNA-binding response regulator  50.72 
 
 
224 aa  76.3  0.0000000000001  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET0697  LuxR family DNA-binding response regulator  50.72 
 
 
224 aa  76.3  0.0000000000001  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_0160  two component LuxR family transcriptional regulator  53.85 
 
 
212 aa  75.5  0.0000000000002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_0632  two component LuxR family transcriptional regulator  53.12 
 
 
224 aa  74.7  0.0000000000004  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.00385785  n/a   
 
 
-
 
NC_008346  Swol_0186  response regulator receiver protein  59.32 
 
 
213 aa  74.3  0.0000000000005  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  decreased coverage  0.00000327076  n/a   
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  39.64 
 
 
213 aa  73.9  0.0000000000006  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_008699  Noca_2635  response regulator receiver  54.24 
 
 
207 aa  74.3  0.0000000000006  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_1936  response regulator receiver  43.75 
 
 
207 aa  74.3  0.0000000000006  Staphylococcus aureus subsp. aureus JH1  Bacteria  unclonable  0.000000150819  n/a   
 
 
-
 
NC_009487  SaurJH9_1902  two component LuxR family transcriptional regulator  43.75 
 
 
207 aa  74.3  0.0000000000006  Staphylococcus aureus subsp. aureus JH9  Bacteria  hitchhiker  0.00000041006  n/a   
 
 
-
 
NC_013595  Sros_0508  response regulator receiver protein  55.74 
 
 
212 aa  73.6  0.0000000000008  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013552  DhcVS_601  DNA-binding response regulator, LuxR family  50.72 
 
 
224 aa  73.6  0.0000000000008  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0938  two component LuxR family transcriptional regulator  58.21 
 
 
242 aa  73.6  0.0000000000009  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_5840  two component LuxR family transcriptional regulator  57.89 
 
 
237 aa  72.8  0.000000000001  Frankia sp. EAN1pec  Bacteria  normal  0.0206065  normal  0.380036 
 
 
-
 
NC_009767  Rcas_1579  two component LuxR family transcriptional regulator  58.21 
 
 
242 aa  73.2  0.000000000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_01100  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  44.44 
 
 
214 aa  73.2  0.000000000001  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  58.62 
 
 
222 aa  72.8  0.000000000001  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_0765  two component LuxR family transcriptional regulator  57.89 
 
 
237 aa  72.8  0.000000000001  Frankia sp. CcI3  Bacteria  normal  0.272345  normal 
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  51.61 
 
 
217 aa  72.8  0.000000000001  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_002976  SERP1384  LuxR family DNA-binding response regulator  44.19 
 
 
207 aa  72.8  0.000000000002  Staphylococcus epidermidis RP62A  Bacteria  hitchhiker  0.000639089  n/a   
 
 
-
 
NC_009972  Haur_0710  two component LuxR family transcriptional regulator  52.86 
 
 
240 aa  72  0.000000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_3262  two component LuxR family transcriptional regulator  53.23 
 
 
222 aa  72  0.000000000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.764026 
 
 
-
 
NC_013757  Gobs_2145  two component transcriptional regulator, LuxR family  41.25 
 
 
220 aa  72.4  0.000000000002  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0196231  n/a   
 
 
-
 
NC_008148  Rxyl_1550  two component LuxR family transcriptional regulator  53.45 
 
 
220 aa  72  0.000000000002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_0973  two component LuxR family transcriptional regulator  36.04 
 
 
216 aa  72.4  0.000000000002  Acidothermus cellulolyticus 11B  Bacteria  normal  0.255067  normal  0.404517 
 
 
-
 
NC_008578  Acel_1760  two component LuxR family transcriptional regulator  56.67 
 
 
303 aa  72.8  0.000000000002  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.887336 
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  52.94 
 
 
234 aa  72.4  0.000000000002  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.336237 
 
 
-
 
NC_013525  Tter_0799  two component transcriptional regulator, LuxR family  57.89 
 
 
226 aa  72.8  0.000000000002  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009523  RoseRS_1984  two component LuxR family transcriptional regulator  53.23 
 
 
220 aa  72  0.000000000002  Roseiflexus sp. RS-1  Bacteria  normal  0.178457  normal  0.123783 
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  50.72 
 
 
253 aa  71.6  0.000000000003  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_2525  two component transcriptional regulator, LuxR family  45.21 
 
 
215 aa  71.6  0.000000000003  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_008527  LACR_0967  DNA-binding response regulator  52.38 
 
 
209 aa  72  0.000000000003  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.598364  n/a   
 
 
-
 
NC_008541  Arth_4147  two component LuxR family transcriptional regulator  62.75 
 
 
218 aa  72  0.000000000003  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1438  response regulator receiver  57.89 
 
 
213 aa  72  0.000000000003  Nocardioides sp. JS614  Bacteria  normal  0.494689  n/a   
 
 
-
 
NC_012850  Rleg_1495  two component transcriptional regulator, LuxR family  57.63 
 
 
207 aa  71.6  0.000000000003  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.194449  normal  0.395611 
 
 
-
 
NC_009523  RoseRS_0474  response regulator receiver protein  57.63 
 
 
471 aa  72  0.000000000003  Roseiflexus sp. RS-1  Bacteria  normal  0.40168  normal  0.0487434 
 
 
-
 
NC_010718  Nther_0747  two component transcriptional regulator, LuxR family  50 
 
 
232 aa  71.6  0.000000000004  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.643618  normal  0.38139 
 
 
-
 
NC_009921  Franean1_5512  two component LuxR family transcriptional regulator  46.15 
 
 
250 aa  71.2  0.000000000004  Frankia sp. EAN1pec  Bacteria  normal  normal  0.631776 
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  53.85 
 
 
224 aa  71.2  0.000000000004  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_014158  Tpau_1410  two component transcriptional regulator, LuxR family  36.52 
 
 
222 aa  71.6  0.000000000004  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.46664  n/a   
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  53.03 
 
 
227 aa  71.6  0.000000000004  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_007413  Ava_3072  two component LuxR family transcriptional regulator  46.07 
 
 
209 aa  70.9  0.000000000005  Anabaena variabilis ATCC 29413  Bacteria  normal  0.875677  normal 
 
 
-
 
NC_013947  Snas_3324  two component transcriptional regulator, LuxR family  49.25 
 
 
219 aa  71.2  0.000000000005  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0107044  normal  0.345616 
 
 
-
 
NC_013947  Snas_2579  two component transcriptional regulator, LuxR family  52.94 
 
 
213 aa  70.9  0.000000000005  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.0500394 
 
 
-
 
NC_012803  Mlut_18530  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  64.71 
 
 
209 aa  70.9  0.000000000006  Micrococcus luteus NCTC 2665  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  51.47 
 
 
219 aa  70.5  0.000000000007  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_2943  two component LuxR family transcriptional regulator  50.77 
 
 
215 aa  70.5  0.000000000007  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_3811  two component transcriptional regulator, LuxR family  46.25 
 
 
206 aa  70.5  0.000000000008  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  hitchhiker  0.00252848 
 
 
-
 
NC_011899  Hore_21820  two component transcriptional regulator, LuxR family  55 
 
 
211 aa  70.5  0.000000000008  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0228  LuxR family two component transcriptional regulator  55.17 
 
 
206 aa  70.1  0.000000000009  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7589  two component transcriptional regulator, LuxR family  54.1 
 
 
225 aa  69.7  0.00000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.438424  normal  0.37363 
 
 
-
 
NC_007777  Francci3_1039  two component LuxR family transcriptional regulator  50.79 
 
 
238 aa  69.7  0.00000000001  Frankia sp. CcI3  Bacteria  normal  normal  0.135118 
 
 
-
 
NC_011369  Rleg2_1389  two component transcriptional regulator, LuxR family  60 
 
 
206 aa  69.7  0.00000000001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.744509  normal 
 
 
-
 
NC_009767  Rcas_0145  LuxR family transcriptional regulator  55.93 
 
 
454 aa  69.7  0.00000000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_4080  two component transcriptional regulator, LuxR family  45.71 
 
 
241 aa  70.1  0.00000000001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.858367 
 
 
-
 
NC_013510  Tcur_1253  two component transcriptional regulator, LuxR family  56.67 
 
 
203 aa  69.7  0.00000000001  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3541  two component transcriptional regulator, LuxR family  39.78 
 
 
211 aa  68.9  0.00000000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.485125  normal  0.513005 
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  56.9 
 
 
224 aa  69.3  0.00000000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013521  Sked_29940  two component transcriptional regulator, LuxR family  47.62 
 
 
234 aa  69.3  0.00000000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.683883 
 
 
-
 
NC_008010  Dgeo_2486  two component LuxR family transcriptional regulator  54.84 
 
 
208 aa  69.3  0.00000000002  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_3277  transcriptional regulator, LuxR family  53.97 
 
 
224 aa  68.9  0.00000000002  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_2789  two component transcriptional regulator, LuxR family  57.14 
 
 
212 aa  69.3  0.00000000002  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.246733  n/a   
 
 
-
 
NC_013204  Elen_1743  two component transcriptional regulator, LuxR family  44.93 
 
 
214 aa  69.3  0.00000000002  Eggerthella lenta DSM 2243  Bacteria  normal  0.370009  normal  0.039988 
 
 
-
 
NC_009972  Haur_3654  two component LuxR family transcriptional regulator  49.21 
 
 
221 aa  69.3  0.00000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000210563  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2087  two component LuxR family transcriptional regulator  50.75 
 
 
213 aa  68.6  0.00000000003  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0358431  n/a   
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  45.95 
 
 
242 aa  68.6  0.00000000003  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_013411  GYMC61_1059  two component transcriptional regulator, LuxR family  37.5 
 
 
221 aa  68.6  0.00000000003  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_014212  Mesil_1051  two component transcriptional regulator, LuxR family  48.53 
 
 
211 aa  68.6  0.00000000003  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.0337978 
 
 
-
 
NC_008697  Noca_4906  response regulator receiver  52.54 
 
 
205 aa  68.2  0.00000000003  Nocardioides sp. JS614  Bacteria  normal  0.275081  normal  0.875639 
 
 
-
 
NC_009523  RoseRS_4323  two component LuxR family transcriptional regulator  52.31 
 
 
246 aa  68.2  0.00000000003  Roseiflexus sp. RS-1  Bacteria  normal  0.239635  normal  0.317944 
 
 
-
 
NC_010718  Nther_2325  two component transcriptional regulator, LuxR family  53.45 
 
 
228 aa  67.8  0.00000000004  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  48.44 
 
 
239 aa  68.2  0.00000000004  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_011725  BCB4264_A1495  DNA-binding response regulator  56.14 
 
 
210 aa  68.2  0.00000000004  Bacillus cereus B4264  Bacteria  unclonable  0.0000174821  n/a   
 
 
-
 
NC_012793  GWCH70_3043  two component transcriptional regulator, LuxR family  47.89 
 
 
225 aa  67.8  0.00000000004  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000652561  n/a   
 
 
-
 
NC_013739  Cwoe_3826  transcriptional regulator, LuxR family  51.72 
 
 
519 aa  67.8  0.00000000004  Conexibacter woesei DSM 14684  Bacteria  normal  0.553807  normal 
 
 
-
 
NC_013757  Gobs_3116  two component transcriptional regulator, LuxR family  50 
 
 
215 aa  68.2  0.00000000004  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_13730  transcriptional regulator NarL  45.59 
 
 
219 aa  68.2  0.00000000004  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.817999 
 
 
-
 
NC_009656  PSPA7_1229  transcriptional regulator NarL  45.59 
 
 
219 aa  67.8  0.00000000004  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_1160  two component LuxR family transcriptional regulator  56.14 
 
 
210 aa  68.2  0.00000000004  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_5202  two component transcriptional regulator, LuxR family  44.93 
 
 
225 aa  68.2  0.00000000004  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.677169  normal  0.920773 
 
 
-
 
NC_010718  Nther_0692  two component transcriptional regulator, LuxR family  36.7 
 
 
213 aa  67.8  0.00000000005  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>