| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4906 |
|---|
| Symbol | |
|---|
| ID | 4595281 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008697 |
|---|
| Strand | + |
|---|
| Start bp | 239065 |
|---|
| End bp | 239682 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639772691 |
|---|
| Product | response regulator receiver |
|---|
| Protein accession | YP_919351 |
|---|
| Protein GI | 119714209 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 0.275081 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.875639 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGTCC TCGTCGTCGA GGATCACCCG ATCTTCCGCG ACGGCCTGCT CGCGGCTCTC
GCCTCGGCCG AGGACCTGCA GGTGGTGGCC GCCGCAGGCA CAGCGGTCGA GGCTATGGCA
GCCCTCGATG CCGCAGACCC CGAGCTCGCG CTCGTCGACC TCGCGTTGCC TGATGGCGCC
GGCATCGACG TGATCAGGGA AGCCACCGCA CGTGGGGTAC GCGTGCTCGT ACTCACCATG
AGCACCGAGC CGACCCAGCT CGTGCACGCG ATCCGGGCCG GGGCCCGCGG CTACGTGGTC
AAGGGCGCTG GCAAGCGCGA CATCGTCGCC GCGATCGAGG CAGTGGCCGC GGGTGACGCG
GTCTTTGGGG CCGAAGTGGC GAACCTGGCC CTGGCCGCGG TCACCCACCA GGACGCGCGT
ACAGCGGCGT TCCCGACTCT GACCCAACGC GAACACGACG TACTGGAGCT ACTCGCGCTC
GGGCTGCCCA ATGCGGGCAT CGCGACGCGT CTCTTCCTGT CGGAGAAGAC GGTGCGCAAC
CACGTCTCGA GCATCCTGGC CAAGCTTGGT GTCGAGACCC GGCACGAGGC CGCCGAGATG
GCCCGGTTAC GTCGCTGA
|
|---|
| Protein sequence | MRVLVVEDHP IFRDGLLAAL ASAEDLQVVA AAGTAVEAMA ALDAADPELA LVDLALPDGA
GIDVIREATA RGVRVLVLTM STEPTQLVHA IRAGARGYVV KGAGKRDIVA AIEAVAAGDA
VFGAEVANLA LAAVTHQDAR TAAFPTLTQR EHDVLELLAL GLPNAGIATR LFLSEKTVRN
HVSSILAKLG VETRHEAAEM ARLRR
|
|---|
| |