Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_2943 |
Symbol | |
ID | 4597444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 3125279 |
End bp | 3125926 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639777548 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_924132 |
Protein GI | 119717167 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGGCGG CGAGGATCGC GGTCCTGGTG GTCGACGACC ACACGCTCCA TCGCGACGGC ACCAGGCGCA TCCTGGAGCA GTACGACGAC GTGGACGTCG TCGGTGACGC CGCGTCGGGT GAGGACGCGT TGGCGATGGT CAACCGGTTG CATCCCCGCG TCGTCCTCAT GGACATCCGC CTGCCAGGGA TGAACGGCAT CGAGGCGACC CGCAGGATCC GAGAGCGACA CCCTGACACG CGGGTGCTCA TCGTGACCGC GTACGACGAC GAGGAGTACG TCCGCGGGGC GTTCGACGTC GGGGCCGCTG GCTACCTCAG CAAGACCGCC CCCGGCCGCG AACTGGTCGA GGCCGTCCGC GCTGTAGCCG GCGGCAACAG CGTGCTGCAG CCGACATTGA TGGCTGCCCT GCTCGCCAAG CGCTCTAGTC CTGCCAACAC GCTCACCGAT AGGGAGAGGG CGGTGTTGCG ACTACTGGCA GAGGGGATGC ACAACAAGCA GATCGCAAGC CGCCTCGGCA TCAGCGCCCG CACCGTCGAA CGGCATTGCG ACAGGATCTA CGGCAAGCTC GGCGTGACCT CTCGGACCGA GGCCGTCGTC CGAGCCATCT CCGCCAACCT GCTCGACGTC TCGGATGTCG CGCGCTGA
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Protein sequence | MKAARIAVLV VDDHTLHRDG TRRILEQYDD VDVVGDAASG EDALAMVNRL HPRVVLMDIR LPGMNGIEAT RRIRERHPDT RVLIVTAYDD EEYVRGAFDV GAAGYLSKTA PGRELVEAVR AVAGGNSVLQ PTLMAALLAK RSSPANTLTD RERAVLRLLA EGMHNKQIAS RLGISARTVE RHCDRIYGKL GVTSRTEAVV RAISANLLDV SDVAR
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