Gene Rru_A2179 details

Gene Information

• Locus tag: Rru_A2179
• ID: 3835606
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodospirillum rubrum ATCC 11170
• Kingdom: Bacteria
• Replicon accession: NC_007643
• Strand: +
• Start bp: 2531057
• End bp: 2531776
• Gene Length: 720 bp
• Protein Length: 239 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 637826281
• Product: LuxR family transcriptional regulator
• Protein accession: YP_427266
• Protein GI: 83593514
• COG category: [K] Transcription
• COG ID: [COG2771] DNA-binding HTH domain-containing proteins

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGACGG CCTCTCCCGG TTTTGACGCC CACCTCGACG CCGCCTGCCG GCAGGCGATG 
GCGCTTGGCT TCGCCGCCGT GCTCTATGAT TACTCGCCGG TTCCGCGCGC CCATGACGGC 
ACCCTGATCA CCCCGACCAT CCTGGAAACC CGCAATCTGC CGGTCGATAT GGCTGAGATC 
TGGTGCAAAC AGGGGTATTA TCAGATCGAT CCGGTGCAAG ACGCCGCCCT GTTGGTCAGC 
GCGCCCTTCG TCTGGTCCCA TGAGGGTGAC CAAAGCGATG TCATGGCCCG GGTTCTGCGC 
GCCGAGCACC GACCGGTTCT GGACTATCTC CGGCACCGTG GCCTGACCCG CGGCGTCACG 
GTGCCGATCC GCTGCGGCGA GGGGGCGCTG GCCACCTTCA CGGCGATTGC CCCGAGCGGC 
GCGCCCTTCC CGCCCGAGGA TCGGCTCTCG AGCCTGGGCC TGCTCGGCCA AAGCTTTCAC 
GACCGGGTTT ATCCCGGGTT TCCGGCCGCC AGCCATCTTT GCCCGGTTGT TCACCTGACC 
CGACGCGAGC GCGAGTGTTT GGCGCTTTGC GGCGAGGGCC TGACCGCCAA GGAGATCGCC 
TATCGCATCG ACCGTTCGGT GCCCACCGTG GTTTTCCACC TGAGCGCCGC CACCCGCAAG 
CTGGGGGCGC GCAACCGCTT CCAGGCGATC GCCCGCGCCG CCTACTACCG CTTGTTATAA 

 

Protein sequence

MTTASPGFDA HLDAACRQAM ALGFAAVLYD YSPVPRAHDG TLITPTILET RNLPVDMAEI 
WCKQGYYQID PVQDAALLVS APFVWSHEGD QSDVMARVLR AEHRPVLDYL RHRGLTRGVT 
VPIRCGEGAL ATFTAIAPSG APFPPEDRLS SLGLLGQSFH DRVYPGFPAA SHLCPVVHLT 
RRERECLALC GEGLTAKEIA YRIDRSVPTV VFHLSAATRK LGARNRFQAI ARAAYYRLL