| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3634 |
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| Symbol | |
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| ID | 8334987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 4065460 |
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| End bp | 4067037 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644956775 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003114378 |
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| Protein GI | 256392814 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2206] HD-GYP domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.567744 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0299379 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGTGA CGCTGGGTGC ACAGGGTGCA CGAACTTCCC GAGTCCGGCT GGCTGAGCTG
CTGGGAATGC TGTCGTTGGC GACAGATCTC GGTCTCGGCC AGTCGATGGA GCATGTCCTG
CGCCAGTGTC TGATCGCGCT GCGCCTCGCC GGCCGGATGG GCATGGATGC CGCGGGGCGC
GAGGTCGTCT ACTACACCTC GCTGCTCGCC TGGGTCGGTT GCCATGTCGA TGCCTATGAG
CAGGCGAAAT GGTTCGGCGA CGACACAGCG CTGAAGGAGG ACTTCCGGCA GACCGATTTC
GCGACCGCGG TCTCCGGGCC GTTGTTCATG CTGCGGCACG TCGGTGCGGG ACGCGGGCTG
CCCGAGCGGG TGCGGATCGG CGCCGCGTTC ATGACCGACG GGCGGCGGGC GGGTGAGGCG
ATGCTGCGGA ACCACTGGCT CGCCGCCGAC CACCTCGCGG AGCAGCTCGG GCTGGGTCAG
CCGGTTCGTG ACGGCATCGA GCAGACCTTC GAGCGCTGGG ATGGCAACGG CGTTCCCAAG
GGTGCGAGCC GGCAGGAGAT CCTGCTGGCC TCGCGGCTGG TGAACCTCGC CGACGTCGTC
GAGTTCTTCC ACCGCACTGG AGGGACCCAG GCGGCAGTCG CGGTCGCGCG GGAGCGGCGC
GGGACGCAGT TCGACCCCGC TGTCGTCGAC GCTTTCGTCG AAGACGCTGC CGCGCTGTTC
GCCGACCTCG ACTGCGTGGA CTGCTGGGAG GCGGTGGTCG CCGCCGAGCC CGCGCTGTCT
GTGCAGTTGA CCGACGCGCA GTTCGAGGCG GCGCTGGAGG CGATCGCGGA CTTCACCGAC
GTCAAATCGC CCTTTACGCT CGGCCATTCG CGGGCGGTCG CGGACCTGGC CGGACAGGCG
GCTCGGGTGT ACGGGCTCGA CGATGCGGAG TCGACAGCGG TACGCCGCGC TGGTCTGGTG
CACGACATCG GACGGCTCGG CGTGCCGAAC ACGATCTGGG ACAAGGCCGG TCCGCTCACC
CGGGCCGAGG TCGAGCGGAT ACGGCTGCAT CCGTATTGGA CCGATCGGGC GCTGGCCTGC
TCGCCGGCGC TGGCATCGCT GGCTGCGATC GCCGTTCAGC ATCACGAGCG GCTGGACGGA
TCCGGGTATC CGCGCGGGCT GTCAGGGGGC GTACTCACTC CGCAGGGGCG GATCCTGGCC
GCGGCGGATT TCTATCGCGC ACGCACCGAA CCGCGTCCCC ACCGGCCTGC CTGCACCGCG
GCCGAGGCGG CGGCGCAGCT GACGGCGGAG GCGAAAGCGG GGCGGATGGA CGGCGACGCG
GTGGCCGCCG TGCTCGGCGC CGCCGGTCAC CGCGCGACCC GGCGCCCGGC GTGGCCCGGC
GGGCTGACCA GGCGCGAGGT CCAGGTGCTG CGGCTGCTGG CACGCGGGCT GTCGAACGGC
GAGATCGCCG AACAACTGGT CATCTCCCGC AAGACCGTCA GCCATCACGT CGAGCACATC
TACGCCAAGA CCGGCACCGC CAATCGCGCG ATGGCAGGTC TTTACGCCGT GCGGCACGGG
CTGATGGACG ACGCTTAG
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| Protein sequence | MRVTLGAQGA RTSRVRLAEL LGMLSLATDL GLGQSMEHVL RQCLIALRLA GRMGMDAAGR
EVVYYTSLLA WVGCHVDAYE QAKWFGDDTA LKEDFRQTDF ATAVSGPLFM LRHVGAGRGL
PERVRIGAAF MTDGRRAGEA MLRNHWLAAD HLAEQLGLGQ PVRDGIEQTF ERWDGNGVPK
GASRQEILLA SRLVNLADVV EFFHRTGGTQ AAVAVARERR GTQFDPAVVD AFVEDAAALF
ADLDCVDCWE AVVAAEPALS VQLTDAQFEA ALEAIADFTD VKSPFTLGHS RAVADLAGQA
ARVYGLDDAE STAVRRAGLV HDIGRLGVPN TIWDKAGPLT RAEVERIRLH PYWTDRALAC
SPALASLAAI AVQHHERLDG SGYPRGLSGG VLTPQGRILA AADFYRARTE PRPHRPACTA
AEAAAQLTAE AKAGRMDGDA VAAVLGAAGH RATRRPAWPG GLTRREVQVL RLLARGLSNG
EIAEQLVISR KTVSHHVEHI YAKTGTANRA MAGLYAVRHG LMDDA
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