| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3947 |
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| Symbol | |
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| ID | 8328140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 4627327 |
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| End bp | 4628079 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 644944423 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003101660 |
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| Protein GI | 256378000 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.657672 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATCGA CCTTGCAGGC GCGACCGCGC GCCGATCGCT TCGAGCGGCT GCTGTCCGAC
CGGTCCGGGG TCAGGCTGCT CGGCGTCCCG GAGGTGAGCG GGGCCTCGCG GACCCGCCTG
CTGGACGAGT TCGCCGCGCT GGCCTCGGCG CGGGGGGCGC TGGTGGCCAG GGGGCGGGCA
CGCGGGGGCG CGTACGGGCT GTTCCAGGAC GCGTTCGGCT CGGTCTCCGC GCACGGCCGC
GAGCGCGACG TGGTCCTGCT GCTGCGCGGG CTGCTGCGGG CGCCGCGCGC GCTCGGCATG
ACCGAGGACG AGCTGCGCCG CGCCGTCGAC GCGGTGCTCG GCTCGCTGCC GGGGCTGGTG
CTGCTGCTCG ACGACGTGCA CCTGGCCGAC CGGCCCTCGC TGGCCCTGCT GGAGCACCTG
GTGCGCCGGG GGGCGGGCTC ACCGCTGCTG GTGGTCCTCG CGCACGAGCC GCGCTCGTGC
CCGCCGCCGC TGGCCGCGCT GCTCGTGGCG GCCGAGCGCG AGTCGCTGGC CACGGTCCTG
CGGCTGCCCG TCGACGGGCA CCGGCTGACC CAGCGCGAGC GGACCGTCCT GGTGGTGCTC
GCGGAGGGCC TGACGGCGGA CGCGATCGCC CGCAGGCTCG ACATCTCGCC GCGCACGGTG
CACCGGCACC TCCAGCACCT GTACCGCAAG CTCGGCACGA CCGACCGGCT CGCGACCGTG
CTGCGCGCAC AGGAGCTGGG CCTGCTGGGC TGA
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| Protein sequence | MTSTLQARPR ADRFERLLSD RSGVRLLGVP EVSGASRTRL LDEFAALASA RGALVARGRA
RGGAYGLFQD AFGSVSAHGR ERDVVLLLRG LLRAPRALGM TEDELRRAVD AVLGSLPGLV
LLLDDVHLAD RPSLALLEHL VRRGAGSPLL VVLAHEPRSC PPPLAALLVA AERESLATVL
RLPVDGHRLT QRERTVLVVL AEGLTADAIA RRLDISPRTV HRHLQHLYRK LGTTDRLATV
LRAQELGLLG
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