Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Emin_1197 |
Symbol | |
ID | 6263798 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Elusimicrobium minutum Pei191 |
Kingdom | Bacteria |
Replicon accession | NC_010644 |
Strand | - |
Start bp | 1292613 |
End bp | 1293290 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 642611675 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_001876084 |
Protein GI | 187251602 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.0485473 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAGAGA AAAAGAAAAA AATAAGAGTG GTTATTGTTG ACGACCAAAC ACTTTTCAGG GAAGGCATTA AGGACGTTCT TACCGGCGAA AAATGGTTAG AAGTTGTAGG CGAAGGGTCG GACGGGGAAG AGGCTGTCGC TTTAGCCAAA AAACTTAAAC CCGACGTGAT TTTAATGGAT ATCAAACTGC CTAAACTTGA CGGTATAAGC GCCACTCGTA AAATAAGGGA AGATAATCCC GCTATAAATG TGCTTATGTT ATCAAGTTTT GAGGATGAAG CCCATGTTAT TGAGGCTATT CAGGCCGGGG CCAACGGATA TTTATCTAAA ATGTTACCCG CATCGGAGCT TTTAAATTCC ATTAAAACAT TTACAAGCGA AGGACTTATG ATTCCGCAGC AGCTTATGGG TAAACTTCTT CACGGTCTGC GTAAGATGGG AGACAACGGC ACTCCGTCCC AGGCGCTTCT TACAAGGACG GAAATTAAAG TTATCAGCCT TTTAGGCAAA GGGCTTAGCA ATAAAGAACT TGCGACGGAA CTTAGTTGCA GTGTTAAAAC AATTAAAAAT CACTTAAACA GCGCGTTTCA CAAACTTGGC GTGGGTAGCA GAACGGAAGC TGTTGTTAAG GCTATAGAAA AAGGTTTAAT ATCCTCGGAA GACAGCAGGA TTTTATAA
|
Protein sequence | MAEKKKKIRV VIVDDQTLFR EGIKDVLTGE KWLEVVGEGS DGEEAVALAK KLKPDVILMD IKLPKLDGIS ATRKIREDNP AINVLMLSSF EDEAHVIEAI QAGANGYLSK MLPASELLNS IKTFTSEGLM IPQQLMGKLL HGLRKMGDNG TPSQALLTRT EIKVISLLGK GLSNKELATE LSCSVKTIKN HLNSAFHKLG VGSRTEAVVK AIEKGLISSE DSRIL
|
| |