Gene Emin_1197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_1197 
Symbol 
ID6263798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp1292613 
End bp1293290 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content42% 
IMG OID642611675 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_001876084 
Protein GI187251602 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.0485473 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAGA AAAAGAAAAA AATAAGAGTG GTTATTGTTG ACGACCAAAC ACTTTTCAGG 
GAAGGCATTA AGGACGTTCT TACCGGCGAA AAATGGTTAG AAGTTGTAGG CGAAGGGTCG
GACGGGGAAG AGGCTGTCGC TTTAGCCAAA AAACTTAAAC CCGACGTGAT TTTAATGGAT
ATCAAACTGC CTAAACTTGA CGGTATAAGC GCCACTCGTA AAATAAGGGA AGATAATCCC
GCTATAAATG TGCTTATGTT ATCAAGTTTT GAGGATGAAG CCCATGTTAT TGAGGCTATT
CAGGCCGGGG CCAACGGATA TTTATCTAAA ATGTTACCCG CATCGGAGCT TTTAAATTCC
ATTAAAACAT TTACAAGCGA AGGACTTATG ATTCCGCAGC AGCTTATGGG TAAACTTCTT
CACGGTCTGC GTAAGATGGG AGACAACGGC ACTCCGTCCC AGGCGCTTCT TACAAGGACG
GAAATTAAAG TTATCAGCCT TTTAGGCAAA GGGCTTAGCA ATAAAGAACT TGCGACGGAA
CTTAGTTGCA GTGTTAAAAC AATTAAAAAT CACTTAAACA GCGCGTTTCA CAAACTTGGC
GTGGGTAGCA GAACGGAAGC TGTTGTTAAG GCTATAGAAA AAGGTTTAAT ATCCTCGGAA
GACAGCAGGA TTTTATAA
 
Protein sequence
MAEKKKKIRV VIVDDQTLFR EGIKDVLTGE KWLEVVGEGS DGEEAVALAK KLKPDVILMD 
IKLPKLDGIS ATRKIREDNP AINVLMLSSF EDEAHVIEAI QAGANGYLSK MLPASELLNS
IKTFTSEGLM IPQQLMGKLL HGLRKMGDNG TPSQALLTRT EIKVISLLGK GLSNKELATE
LSCSVKTIKN HLNSAFHKLG VGSRTEAVVK AIEKGLISSE DSRIL