| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3341 |
|---|
| Symbol | |
|---|
| ID | 4689144 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 3537567 |
|---|
| End bp | 3538394 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639836354 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_983559 |
|---|
| Protein GI | 121606230 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0108642 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGATC GCAGAGGAAG CACCCATGAC GACATGCTGA AGTCGCCGGG GGGAATTGCC
AATACGCAGC AATGCGTATG CATCAGCCAG TGGAGCCAGG CCATGAACCA CCTCACCCGA
AACGACTTCG CCAGCGCGTT GCAGGTGCTT GCTCGGGTCG AAGCGCAGGC GTATAGCGTG
CGCAGCTTTG CGCAGGCGGT GGTGCAGGCG CTGAACAGCT TCGTGGCTGC CGAGTTGACG
ACGCTCTCGG TCTGTGACCT GGCTAGCGAC CAGCGCGAGG TGCTGGGCCT GCCCAGCGTG
CGGCTGGAAA GCGACGAGGT GGAGGGCTTT GAACGGCATT TTTTCGAGCA CTCGCCGCCT
CGCCACCATG ACTTGCAGCG CAGAGTGCCT GAGTACGCCA TTGCCGTACC GCTGCTCAGC
GACCGCCGAA CGCTGGTGAG CATCGTGCTG AAGCGGCGCG GCCGTGATTT TGACGAGCGC
GACCGTGAGC GGCTGGAGTT GCTGCGCCCG CATCTTGCTT TTCTTTACCG CCACGCACGC
CATGCGCGGG CCGCCGTCAC GCTGGAGGAG GGCGAGGCGC CGCTGCCACC CGACATCCAT
GCGCCAGGCC TGACGCAACG CGAGGCCGAG GTGATGCACT GGCTGGCCTG CGGCAAGATG
GATGCCGAGA TCGCGGCGCT GCTGGCCATC AGCCCGCGCA CCGTGCAAAA GCATCTGGAG
CATATCTATG TGAAGCTGGG CGTGGAAACG CGAACGGCGG CGGTCATGCG CGCGCTGGCG
ATCTGTCATC ACGCAAGCCT CGGTAATTCA GACCATTTTC TTGTTTAA
|
|---|
| Protein sequence | MQDRRGSTHD DMLKSPGGIA NTQQCVCISQ WSQAMNHLTR NDFASALQVL ARVEAQAYSV
RSFAQAVVQA LNSFVAAELT TLSVCDLASD QREVLGLPSV RLESDEVEGF ERHFFEHSPP
RHHDLQRRVP EYAIAVPLLS DRRTLVSIVL KRRGRDFDER DRERLELLRP HLAFLYRHAR
HARAAVTLEE GEAPLPPDIH APGLTQREAE VMHWLACGKM DAEIAALLAI SPRTVQKHLE
HIYVKLGVET RTAAVMRALA ICHHASLGNS DHFLV
|
|---|
| |