| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_12510 |
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| Symbol | |
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| ID | 5223190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium tuberculosis F11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009565 |
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| Strand | - |
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| Start bp | 2810784 |
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| End bp | 2814197 |
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| Gene Length | 3414 bp |
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| Protein Length | 1137 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640607270 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_001288439 |
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| Protein GI | 148823685 |
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| COG category | [K] Transcription
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
[COG3903] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 56 |
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| Plasmid unclonability p-value | 0.00000000000000380393 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 215 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCGGC GGCCAAGAGA TTTCGAGCAA TCTAGGCGCA GGTGCCGATG TAATGCGCTA
CGCGCTGGCT CGATGCTGGC TAGCATGAGC AAGATTCACC CCGGCGTCGA CGTGGTACCT
GTGGACTGGA GCGCAGATGG TGTGAGCGAG CTTGTACCGA CGGGCACGGT GACGTTGCTG
CTGGCCGATA TCGAGGGCGC GACCCACCTG CCGGGGTCTC AGCTTGACAC GACGGCGATC
GCCAAACTGG ACCGAACGCT GACCGAATTG GTTCGCGAGC ACCGCGGGGT TTGCCCGGTC
GAACAGGGCG AAGGCGACAG CTTCTTGGTG GCGTTCGCCC GCGCATCCGA CGCCGTGGCG
TGCGCCCTGG GCTTGCAGCG GGCGCCGCTG GCACCGATCC GGCTGCGCAT CGGCATGCAC
ACCGGGGAGG TGTCGTCACC CGACGAGGGC AACTGCGTAG GGCCGACCAT CGACCGCACC
GCCCGGCTGC GCGAGCTGGC CCACGGGGGC CAGACCGTGT TGTCGGGAAC TACCAGCGAT
CTGGTTGCTG ACCTGCTGCC CAAGGACGCG TGGCTGAACG ACCTCGGTAC CTACCGGCTG
GACGACCTGC CCCGACCGGA ACGGGTGGTG CAGCTGTGTC ACCCTGATCT GCACAACGCG
TTCCCGCCGC TGCGGACCCG GAAAGTCGTT GGTGCGCACT GTCTTCCGGC CCAGCTCACT
CGGCTGGTGG GGCGCGTCGA CGAAGTGGCG CAAGTCCGTG GGCTGCTGGA CGTCAAACGG
TGGGTCACCC TTACCGGTGT CGGCGGGGTC GGAAAGACAC GCCTGGCGAC ACAGGTCGCG
AGCGCCGTTG CCGACGGTTA TCCGGACGGG GTTTGGTATG TCAACCTGGC GCCGATCACC
GACCCGGCGC TGGTGCCGAT CGCGGCGGCG CGGGTTTTGG GGTTGCCGGA TCAGCCGGGC
CGCTCGACGG TGGACACCAT TGTGCGGCGT ATCGGCGACC GGCGCATGCT GGTAGTGCTG
GACAACTGCG AGCACTTGCT CGACGGGTGC GCGGCTCTGA TCGTCGCGTT GCTCGGGGCG
TGCCCAGCGC TGAGGGTATT GGCGACCAGC CGGGAACCGA TCGCGGTGGC CGGTGAGCAG
ATTTGGCGGG TTCCCCCGCT GGGGCACGGC GAGGCGATCG AGTTGTTCAC CGACCGCGCT
CGTGAGGCGC GGCCCGAACT CGAGATCACT GCCGACAACC TCGCCCTGGT GACCGAGATC
TGCCACCGAC TCGACGGCAT TCCGCTGGCG ATCGAACTTG CAGCGTCGCG GGTGCGTGCC
CTGGCGCTGA CCGAAATCGT CGACAGCTTG CATGACCGGT TCCGCCTGCT GACCGGTGGA
TCGCGTATTG CGGTGCGCCG CCAGCAGACG ATGCGGGCTT CCGTCGACTG GTCACATGCG
CTGCTGACCG GACCGGAGCA GGTGCTGTTT CGGCGACTGG CGGTTTTCCC GAGCGGGTTT
GATCTCGACG GTGCCCAAGC GGCAGCCGCC GGCGGTGACG TTCAGCGCTA CGAGGTGGTC
GATCTGCTCA GCCTGCTGGC AGACAAGTCT CTGGTGGTGA CCGACGACAG CGACGGCCGA
ACGCGCTACC GCCTGCTAGA GACGGTGCGC CAGTATGCGT TGGAGAAGCT GCGTGAATCC
GGCGATGCCG ATGCCGTGCG TGCGCGACAC CGCGACCACT ACGCGGCCGT TGCCGCCGGG
CTTGACGCCC CCTCGGTGGC CGGCCATGAA CGCCGGCTCA ACCAGGCCGA GCTCGAGATC
GACAACCTAC GGGCCGCTTT CGCGTTCAGC CGCGAGAATG GCGATACCGG CCACGCGTTG
CTGTTGGCAT CATGTCTGCA GCCGTTGTGG CGTGCCCGGG GCCGCCTGCA AGAGGGGCTG
GCCTGGTTCG CCGCCGCCCT GGCCGACCAC GATGCACATC CGGCGGGGGC CGACCCTGGG
TTGTATGCGC GGGCACTGGC CGACCGGGCC CTGATAGATG CCGTGGCCGG CATCACCGAC
CGCCTAGATG ATGCCCAGAA GGCGCTGGCT ATAGCGCGCG ACATCGAGGA TCCGGCCCTG
CTGGCGCGGG CGCTGACCGC GTGCGGGGGT GTCGCCGCCT ACAACGCGGA TCTGGCGCGA
CCGTGGCTGG CCGAGGCCGT CGGCCTGGCC CGGGCGGTGG GCGACAAGTG GCGGTTGGCC
GAGGTTCTGG CCTGGCAGGC CTATGTCGGG TTCGCCGGCG AGGGTGACCC GGGCGCGACC
CGCGCGGCGG GCGAGGAGGC ACGAAGCCTC GCCGACGAGA TTGGTGATGC ATTCCTTTCA
CGTTCATGTC GCTGGGCGCT GGCCGCGGCG AATCTCTGGC AGGGCAACCT CGAGGCAGCG
GTCGGCCTGT CGCGCGAGGT GATCGGCGAG TCCGACGCCG CGCACGACAT GGTTAGCAGC
TGCGCGGGCC AGGCTTGCTT GGCGCACGCG TTAGCGCACC GCGGCGACAC CGAGGCGGCC
GCCGCCGCCC AAGCCAGCAT CGACACCGCC GTTGGACTCA GCCCGGTGCT GTCGGGCTCG
GCCTGCTCCG CGCTGGTCTT CGCGACCCTG GCCGCCGGTG ACGTCGCGGC CGCCGAACAC
GCCCGCGAAT CGGCAACGCG ATTCTTTGGT GCCAGCGCGG CGGCGATCAT CAACGACCCC
ACCAGTTCGG CTCAAATATC GTGTGCGCGA GGTGATCTGA ACGCGGCGCA CCGATTGGCC
GACGGCGCAG CGTCGATCAC TCGTGGCGTG CACCGCGCCC GCGCCCTGAC TACCCGTTGC
CGCATCGAGA TCGCCCAAGG GGATCGCCAC CGGGCCGAGC GCGATGCCCA CGACGCCCTC
GGCGTGGCCG CGTCCATTGG GGCATACCTA TGGGTCCCCG ACATTCTCGA GTGCCTCGCC
TCGGTGATGG CGGATGCCGG CAGCAACCGG GAAGCGGTGC GGCTGTTCGG CGCGGCCGAC
GCGGCCCGGG GGCGCATGGG AGCGGTCCGC TTCGGGATCT ACCAGGCGGG CTGTAACTCG
TCGCTAGCCA CCCTTCGAAA ATCCATGGGT GACAGCGAGT TCGACGATGC CTGGGCCGAA
GGAACTGCGT TATCGATCGA TGAGGCGATC GCGTACGCGC AACGAGGCCG CGGTGCACGG
AAACGCCCGA CAAGTGGCTG GGGCGCGTTG ACACCGACAG AGCTTGAGGT GGCTCTACTG
GTCGGTGAGG GACTCAGCAA CAAGGAGATC GGCGTCCGCC TATTCATCTC GCCGCGGACC
GTGCATTCCC ACTTGACCCA CGTCTACACC AAGCTCGGCC TGTCCTCCCG TCTTCAACTC
GCGCAGCAAG CTGCGCGCCG GGGCGAATCA GAACGAGGGC CGTCGCGGCC ATAG
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| Protein sequence | MDRRPRDFEQ SRRRCRCNAL RAGSMLASMS KIHPGVDVVP VDWSADGVSE LVPTGTVTLL
LADIEGATHL PGSQLDTTAI AKLDRTLTEL VREHRGVCPV EQGEGDSFLV AFARASDAVA
CALGLQRAPL APIRLRIGMH TGEVSSPDEG NCVGPTIDRT ARLRELAHGG QTVLSGTTSD
LVADLLPKDA WLNDLGTYRL DDLPRPERVV QLCHPDLHNA FPPLRTRKVV GAHCLPAQLT
RLVGRVDEVA QVRGLLDVKR WVTLTGVGGV GKTRLATQVA SAVADGYPDG VWYVNLAPIT
DPALVPIAAA RVLGLPDQPG RSTVDTIVRR IGDRRMLVVL DNCEHLLDGC AALIVALLGA
CPALRVLATS REPIAVAGEQ IWRVPPLGHG EAIELFTDRA REARPELEIT ADNLALVTEI
CHRLDGIPLA IELAASRVRA LALTEIVDSL HDRFRLLTGG SRIAVRRQQT MRASVDWSHA
LLTGPEQVLF RRLAVFPSGF DLDGAQAAAA GGDVQRYEVV DLLSLLADKS LVVTDDSDGR
TRYRLLETVR QYALEKLRES GDADAVRARH RDHYAAVAAG LDAPSVAGHE RRLNQAELEI
DNLRAAFAFS RENGDTGHAL LLASCLQPLW RARGRLQEGL AWFAAALADH DAHPAGADPG
LYARALADRA LIDAVAGITD RLDDAQKALA IARDIEDPAL LARALTACGG VAAYNADLAR
PWLAEAVGLA RAVGDKWRLA EVLAWQAYVG FAGEGDPGAT RAAGEEARSL ADEIGDAFLS
RSCRWALAAA NLWQGNLEAA VGLSREVIGE SDAAHDMVSS CAGQACLAHA LAHRGDTEAA
AAAQASIDTA VGLSPVLSGS ACSALVFATL AAGDVAAAEH ARESATRFFG ASAAAIINDP
TSSAQISCAR GDLNAAHRLA DGAASITRGV HRARALTTRC RIEIAQGDRH RAERDAHDAL
GVAASIGAYL WVPDILECLA SVMADAGSNR EAVRLFGAAD AARGRMGAVR FGIYQAGCNS
SLATLRKSMG DSEFDDAWAE GTALSIDEAI AYAQRGRGAR KRPTSGWGAL TPTELEVALL
VGEGLSNKEI GVRLFISPRT VHSHLTHVYT KLGLSSRLQL AQQAARRGES ERGPSRP
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