Gene Pden_4740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4740 
Symbol 
ID4583243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp225218 
End bp225700 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content64% 
IMG OID639772044 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_918497 
Protein GI119387463 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.318753 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.272493 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTTTGCG ATGTCATGCT GCCGGGGCGC AGCGGCTTCG AACTGCTGGG CGATCTGCGT 
GCCTCGGGCA AGCTGGCGGA AACGACCGCC TTCATCTTTC TTACCGCGCT GTCGGATCGC
GAGCCGCATC TGACGGGGCT GCGCGCCGGC GCGCATGACT ACCTCACCAA GCCGGTCGAT
CTCGATCTTC TGCATCTCAA GATCGAAAAT ACCCTGGCCT TCGCGCATCG CCTTCGCGAC
GGCATGGTCC CGGCGGGCGA GCCGTTGGAC GTTCACCTGT CCCGCCGCGA GGAGCAGGTC
CTGTCCCTGC TGGGGCAGGG CGAGCGGACC GGCGCCATCG CATCCCGGCT GGAGATTTCA
GAGCATACCG TTAGCCATTA CATCAAGGAG CTTTACCGCA AGCTTGGCAT CAACAATCGC
GCCGATGCCG CCCGCATGGC CATCTCGCTG GGTCTTGCGG GTCGTCCGGG GCTGAGATCC
TGA
 
Protein sequence
MLCDVMLPGR SGFELLGDLR ASGKLAETTA FIFLTALSDR EPHLTGLRAG AHDYLTKPVD 
LDLLHLKIEN TLAFAHRLRD GMVPAGEPLD VHLSRREEQV LSLLGQGERT GAIASRLEIS
EHTVSHYIKE LYRKLGINNR ADAARMAISL GLAGRPGLRS