| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3490 |
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| Symbol | |
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| ID | 5671861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 4149716 |
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| End bp | 4152568 |
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| Gene Length | 2853 bp |
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| Protein Length | 950 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 641242378 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_001507798 |
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| Protein GI | 158315290 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3899] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.123756 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.368778 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACAG CCGCGATGAC CACCGCCGAG CTCACTGCGA CGGGTGCGCG CGGCACCGTC
CGAACAGCGG AGCACGGCCG GATCCTGAAC GTGCTCGAGG GCGCGGACGG CGGTGGCCCG
GCGATCGTGG AGCTCACCGG CGATCCCGGC TACGGCAAGA CCCGGCTGCT GACGGCCGTG
GCGGACGAGG CCCGCAAGCG TGGCGTCGAC GTGCTGCGGG GCAGGTCGCT CGAGACCCGC
CGGCACCGGC CCTTCCACCC GTTCATCGAC GCCTTCAGCA CCTGGCGGCC CACCGGCGCC
GGGCCGCTGC CGCAGGCCAC CGCGTTCGTC CAGTCCCTGG CGACCGCCGG TGACATGCTC
GCCGACACCG AGACCGGCCG CTGCCGGCTC TTCGCCGAGC TGCGGTCGCT GCTGGAGGAG
ACACTGGCGG CGGCGCCCGA CCCGCTGCTG CTGCTGCTCG ACGACGTGCA CTTCGCCGAC
CGGGCGTCGG TCGAGCTGCT CGAGATCCTG ACGCGTTGGC CGCTGGGGCA GCCGCTGTCG
GTCGTGGTGG CGCATCGCCG GCGTCAGATG TCCTCCTGGC TGCAGGTCAC CCTGCAGCAG
GGCGTCGAGG TGGGCGCGGT GGACCAGGTG GCGTTGCCGG CGCTCAGCCT GCGCCAGAGC
GCCGAGCTTC TCGGGCTCGC GGTCACCGCG CCGGGGCTGG CCGACCTGCA CGAGCGCAGT
GCCGGCAATC CGCTCTACCT GACGGCGTTG GCCGAGCGGG AGCGCGGCCT GAACGGAGTG
GACCGGACCG GCCCGGACCC GACCGGCGCG GGTGGCCACG ACCCGGCCGG CGAGCCGCCC
GACCTGTGGA CGCGCAGCGC GCTCGGCGCC CGGCTGCTGG CCGAGACCGT GCATCTCGAT
GCCCGCCAGC GGCTGGTCGC GCACGCGGCG GCCGTGCTCG GCGACACCTT CTCGGTCGAC
GCCGTGGCGG CCGTCGCGCA GCTCGACCGG GAGGAGGCCT GCCAGGCGCT CGGCCAGCTG
CGCGGCCGCG ACCTGGTGCG CATGGTGCCG GGCGGCGAGC TGGTCTTCCG CCACCCGCTG
CTGGGCAGCT GTGTCTACGG GGAGACCGAC TCCTGCTGGC GGGCCGGGGC GCACCGACGC
GCCCTCGAGC ACCTCCGGTC GACGTTCGCC GCGCCGGCCG TGCTCGCCCG GCATGTCGAG
CGCTCCGGAT CGCACAGCCA TGCCCTGGAC CTGACGGTGC TGCTCGACGC GACCCGGGCG
GCCGTGCAGA GCGAGCAGGG CACCGAGGCC GCCCACTGGC TCAGCGCCGC CCTGCGGCTG
CGCCGCGCCG CCCCGGAAAC CCCGAACGGC ACCGGCAGCA CCGGTGAGAC GGCCGGTGCG
GCCGGTGCGG GGCTCCCGCC GGTCGGCCCG GAGGTCTGGC GCCCGGTGAT CGACCTGCTC
GCCCGCCCCG ACGCCGTCGC GCGCCTGCGC GCCCTCGGCC AGGAGGTCCT GAACACCCCG
GCCGCGTACG GGCCGGCCGG CCGGGTGGGC ACGGCGGCGC ACCTGGCGAT GGTCTCGGCC
TCGCTGGGCT GCCACGACCA CGCCGTCGCC CTGCTGTCGA TCGCGCTCGC CGACGCCCGG
GGGCCGGCCG AGGAGGGGCG CGTGCAGCTG TTCGCCCAGC TCGCCCGCAT CGTCTCCGGA
GGCATACCGA GCCGCGCCGA GGTGGACGCG CTGACCGGGC CGGAGCCGGC CGGCGACCCG
CTGACCCGGG CCGGCGGGCT CGCGGTCCGG GCGCTGTGCG CCGCGCTCAC CACCGACCGC
GGCGCCACCG GGAACAGGTC CGCGGGCGCG GAGGCGGACG CGGCGGCCGC CGCGCTCGAC
GCCCTGGCGG TGAACGGCCC GGACCCCTCG GGCCCGGAGC TGTACTTCCT GCAGTGCCTG
GGCTGGACGG AGGCGATGCT CGGTCGCTAC GACAGCGCGC ACGCCAGGAT CACCCGCGCG
GTGCGCGGCG CCCGCAAGCA CGGCGAGCGC CACCTGCTGC CCGCCCTGCT CAACAGCCTC
GCCTACATCC ACTACCAGTC GGGGCGCCGG AGCGAGGCGA TCGAGGTCAC CCGGGAGGCC
CAGCGCGTGT CGCAGCGGGC CGGTCGCGCC GACCAGGTGG CACTGGCCCA GGCCGTGGCC
ACGGCCGCCT GGGCCGGGCT GGGGCGCTCC CCCACGTTCG GCCCGGAGCT GCCGGAGGGC
GTGCACGCCG ACGCGCCCCG CACGCCGCTG ACCGCGCTGC TGTTCGCCGA GGCCGCGCTG
GCCGCCGGCG ACGGACCGGC CGCCCTGGCC CTGCTGGGGT CGAAGCGGGA GACCTGGCGG
GTCGCCGAGC CGATCCCGGT GCTGGGTGCC CGCATCTTCG AGGTGCTGGC CGCCGCCGCG
CTGCTGGCCG GGGAGGATCC ACGCCCGTGG GCGGCCCGAG CGGCCGAGGA GGCCGCCCGG
GTCGGGCTGC CCGAGCAGCG GGGCCACGCG CTGCTCGCCC GCGGCTACGC GCTGGGTCGC
GGCCCGGAGG CCGACCGGTG CTACGCCGAG GCGGCCGGCC TGCTGGCGGG CGCGCCCGCC
GGCGGCCGGG CCCGGACGTT CGCGCGGTCG GCTCAGCAAC GGCGCCACCG CCCCGGCCCC
GACCCGCTGG TCGAGCTCAC CACCAGGGAG CAGGAGGTCG CCCAGCTCGC CGGCCAGGGG
CTGCGGACCC GGGACATCGC CAGCCGGCTG CGGGTGAGCC CGCGCACCGT CGACACCCAC
CTCTCCCACA TCTACGACAA GCTCGGCATG AGCTCGCGGG TCGAGCTGGC CCGGTTGCTG
TCCCCGGTCC CGCTGGTGCC CCCGGGCCAC TGA
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| Protein sequence | MTTAAMTTAE LTATGARGTV RTAEHGRILN VLEGADGGGP AIVELTGDPG YGKTRLLTAV
ADEARKRGVD VLRGRSLETR RHRPFHPFID AFSTWRPTGA GPLPQATAFV QSLATAGDML
ADTETGRCRL FAELRSLLEE TLAAAPDPLL LLLDDVHFAD RASVELLEIL TRWPLGQPLS
VVVAHRRRQM SSWLQVTLQQ GVEVGAVDQV ALPALSLRQS AELLGLAVTA PGLADLHERS
AGNPLYLTAL AERERGLNGV DRTGPDPTGA GGHDPAGEPP DLWTRSALGA RLLAETVHLD
ARQRLVAHAA AVLGDTFSVD AVAAVAQLDR EEACQALGQL RGRDLVRMVP GGELVFRHPL
LGSCVYGETD SCWRAGAHRR ALEHLRSTFA APAVLARHVE RSGSHSHALD LTVLLDATRA
AVQSEQGTEA AHWLSAALRL RRAAPETPNG TGSTGETAGA AGAGLPPVGP EVWRPVIDLL
ARPDAVARLR ALGQEVLNTP AAYGPAGRVG TAAHLAMVSA SLGCHDHAVA LLSIALADAR
GPAEEGRVQL FAQLARIVSG GIPSRAEVDA LTGPEPAGDP LTRAGGLAVR ALCAALTTDR
GATGNRSAGA EADAAAAALD ALAVNGPDPS GPELYFLQCL GWTEAMLGRY DSAHARITRA
VRGARKHGER HLLPALLNSL AYIHYQSGRR SEAIEVTREA QRVSQRAGRA DQVALAQAVA
TAAWAGLGRS PTFGPELPEG VHADAPRTPL TALLFAEAAL AAGDGPAALA LLGSKRETWR
VAEPIPVLGA RIFEVLAAAA LLAGEDPRPW AARAAEEAAR VGLPEQRGHA LLARGYALGR
GPEADRCYAE AAGLLAGAPA GGRARTFARS AQQRRHRPGP DPLVELTTRE QEVAQLAGQG
LRTRDIASRL RVSPRTVDTH LSHIYDKLGM SSRVELARLL SPVPLVPPGH
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