| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4471 |
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| Symbol | |
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| ID | 8335825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5093514 |
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| End bp | 5095556 |
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| Gene Length | 2043 bp |
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| Protein Length | 680 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644957573 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003115175 |
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| Protein GI | 256393611 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.129361 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGAAG CTCTCGACTG GGCGCCGACG CGCGCCCGGT TGTTGCCACC GGACACCACC
GACTTCACCG GCCGGCTCGG CGAGCTGGCC GCGCTGACCG ACCCCGCTAC CTTCCCGGCG
CACACCGCCG CGCTGTTCGT GGTGACCGGC TCCGGCGGTA CCGGCAAGAC GGCGCTGGCG
GTCCGCGCCG CACGGCTGGC CGGCGACTCC TTCCCCGACG CGCACCTGTA CGCCGATCTC
GGCGGCTACA CCGGCTCCCC GACCCCGGTA CCGGACGTCC TGCGCCGCTT CCTGCGCGCC
CTGGGCGCCG CCGGTCCGCT GCCGGAGGAC CGGGACGAGC TGGTCGGCAT GTTCCGCACC
GCGCTGGCCG GGCAGCGCGC GCTGGTGGTC CTGGACGACG CCGCCGACGA GGCGCAGGTG
CGGCCGCTGC TGCCGACCGG CCCGGACGCG CTGGCCATCG TCACCAGCCG CAACTGGCTC
GGCGGGCTGG CCGGCGCGCT GCCGCTGCGG CTCGGGCCGA TGCCGGACGC CGAGGCCGCC
GCGATGCTGG CCCGGGTGCT CGGCGCGCGC TGGACCGGCA CGGAGGACGT GGACGGCCTG
CTGGCGCTGT GCGGACACCT GCCGCTGGCG ATCCGCATCG CCGCCGCGCG GCTGCTGTCC
CGGCCGCAGA TGACCGTGGA CGACCTCTGC GACCAGCTGC GCGACGAGCG CCGCCGGCTC
AAACGGCTGA CCGCCGGCGA CATCACCGTA CACGGTGTGC TGACCTCCTC CTACGACGCC
CTGGAACCCG GGGACCGCAA GGTGTTCCGG CGGCTGGCGC TGTTGCGTGG CTTCGACTTC
TGCACCGAGG CGGCGGCGCA GGTCGCCGGG ATCAGCCGGG AGGAGGCGCA GGAGGCGCTG
GACCGGATGG CCGACCGCAG CGTGGTCCGC CCGGAGTCCG AGTCCGGCCG CTACAGCCTG
CACTCGCTGG CCCGGCTGTT CGCCGCCGAC CGGCTCGCCG CGGACGACGA CCCCGAGACG
GCGCGCGCTG CCGAAGCCGG GCATCTGCGC TGGGTCCTGT CGCGGTTGCG GGCCGCCGCG
GATCTGGTGA ACCCGTGCAT GGTGCGGCTG CCCGCGAGCG AAACAGAACC CTGCGACGGC
ACCTCGGCGA CGACCTCCGG CAACTCCGCG ATCGGCACCG GTTCCCAGGA GATCGCCCCG
GCGCACCGCG AGGCGGCGCT GGCCTGGCTG GACGCCGAGC GCCACAACCT GCTGGCGCTC
GTCCGCCACC ACCGGCGCTT CGGCGACCCG GCGGTGTGCT GGACCGTCCC GGACGCCCTG
CGCGGCTACT ACCACCAGCG GCGCCGTCTG CGGGAGTGGA CGCGCATGGC GGACATCGGG
ATGGCCGCCG CGCAGCGTGA GCAGAACCTG CGCGCCCAAG CCGCCATGTC GCTGAATCTG
GGCATGGCGG CCTTCGCCGC GAACCGGCTG GACGAGGCCG GTGACCGCTA TCAGCGCGCT
GTCGAACTCG GTCTGGGCTC GGGGTGGCGG GAGATCGAGG CCGCCGGCTA CCGCAACCTG
GCCGGCGTCG CGCTCGGGCA CGGCGACACC GCCCGGTGGG AGAAGTACAT GTCGCTGTGG
GCGGAGCTGA ACGAGCGGGT GGACCCGCGG TTCACGCCGG CGCTGTCGGC GCTGCCAGCG
CTGTCAGAAC TGCCGGCGAC CGGCGCCGAC CGGGGCGCCG AGCCGGGCGC CGACAACGCG
CCGACCGCCA CCGAACCGAC CCCCGCCGAT GCAGCCCTCA CCGCCGTCGC GCTCCTCGCT
GCCGACATCC CGCAGAGCGG CCAGGACCGC GCGACGGCCG AGGAGTGGTC GGTCCTCAGC
CGCCGCGAGC AGACCGTGGC GCGGCTGGTC GTGCAGGGCT TGACCAACCA GCAGATCGCC
AAGCGGATCC GCTGCTCCCC GGAGACGGTG AAGTTCCACC TGCGGAACAT CTTCCGCAAG
CTGGGCATCG GGTCGCGCGT GGAGATCGCG CGGTTCGTGC TGGCTTCCGG CGCGCCGGGC
TAG
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| Protein sequence | MREALDWAPT RARLLPPDTT DFTGRLGELA ALTDPATFPA HTAALFVVTG SGGTGKTALA
VRAARLAGDS FPDAHLYADL GGYTGSPTPV PDVLRRFLRA LGAAGPLPED RDELVGMFRT
ALAGQRALVV LDDAADEAQV RPLLPTGPDA LAIVTSRNWL GGLAGALPLR LGPMPDAEAA
AMLARVLGAR WTGTEDVDGL LALCGHLPLA IRIAAARLLS RPQMTVDDLC DQLRDERRRL
KRLTAGDITV HGVLTSSYDA LEPGDRKVFR RLALLRGFDF CTEAAAQVAG ISREEAQEAL
DRMADRSVVR PESESGRYSL HSLARLFAAD RLAADDDPET ARAAEAGHLR WVLSRLRAAA
DLVNPCMVRL PASETEPCDG TSATTSGNSA IGTGSQEIAP AHREAALAWL DAERHNLLAL
VRHHRRFGDP AVCWTVPDAL RGYYHQRRRL REWTRMADIG MAAAQREQNL RAQAAMSLNL
GMAAFAANRL DEAGDRYQRA VELGLGSGWR EIEAAGYRNL AGVALGHGDT ARWEKYMSLW
AELNERVDPR FTPALSALPA LSELPATGAD RGAEPGADNA PTATEPTPAD AALTAVALLA
ADIPQSGQDR ATAEEWSVLS RREQTVARLV VQGLTNQQIA KRIRCSPETV KFHLRNIFRK
LGIGSRVEIA RFVLASGAPG
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