More than 300 homologs were found in PanDaTox collection
for query gene Franean1_6586 on replicon NC_009921
Organism: Frankia sp. EAN1pec



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009921  Franean1_6586  short-chain dehydrogenase/reductase SDR  100 
 
 
302 aa  580  1e-164  Frankia sp. EAN1pec  Bacteria  normal  0.685606  normal 
 
 
-
 
NC_011365  Gdia_0840  short-chain dehydrogenase/reductase SDR  42.14 
 
 
266 aa  157  1e-37  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.551106  normal  0.267139 
 
 
-
 
NC_014213  Mesil_3299  hypothetical protein  37.99 
 
 
257 aa  148  1.0000000000000001e-34  Meiothermus silvanus DSM 9946  Bacteria  normal  0.982919  normal  0.296802 
 
 
-
 
NC_007492  Pfl01_4194  short chain dehydrogenase  37.28 
 
 
253 aa  147  2.0000000000000003e-34  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.896625 
 
 
-
 
NC_013411  GYMC61_2515  short-chain dehydrogenase/reductase SDR  36.82 
 
 
250 aa  146  4.0000000000000006e-34  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011892  Mnod_8333  short-chain dehydrogenase/reductase SDR  36.82 
 
 
257 aa  145  6e-34  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.319832  n/a   
 
 
-
 
NC_013946  Mrub_0772  short-chain dehydrogenase/reductase SDR  38.43 
 
 
256 aa  144  2e-33  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_1547  short-chain dehydrogenase/reductase SDR  37.72 
 
 
269 aa  141  9.999999999999999e-33  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.255418  n/a   
 
 
-
 
NC_008752  Aave_1551  short-chain dehydrogenase/reductase SDR  36.97 
 
 
270 aa  140  1.9999999999999998e-32  Acidovorax citrulli AAC00-1  Bacteria  normal  0.2513  normal  0.363007 
 
 
-
 
NC_002947  PP_1817  short chain dehydrogenase  35.97 
 
 
253 aa  138  1e-31  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_1686  short-chain dehydrogenase/reductase SDR  38.38 
 
 
257 aa  138  1e-31  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_1709  short-chain dehydrogenase/reductase SDR  38.38 
 
 
266 aa  138  1e-31  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1754  short-chain dehydrogenase/reductase SDR  38.38 
 
 
257 aa  138  1e-31  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_0346  short-chain dehydrogenase/reductase SDR  36.81 
 
 
256 aa  137  2e-31  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0244456  n/a   
 
 
-
 
NC_009051  Memar_2033  short-chain dehydrogenase/reductase SDR  37.14 
 
 
270 aa  137  3.0000000000000003e-31  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_013730  Slin_2192  short-chain dehydrogenase/reductase SDR  34.53 
 
 
256 aa  137  3.0000000000000003e-31  Spirosoma linguale DSM 74  Bacteria  normal  hitchhiker  0.0046226 
 
 
-
 
NC_009656  PSPA7_3623  short chain dehydrogenase  36.33 
 
 
253 aa  135  6.0000000000000005e-31  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0211534  n/a   
 
 
-
 
NC_009921  Franean1_3277  short-chain dehydrogenase/reductase SDR  38.27 
 
 
245 aa  135  8e-31  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_010335  Caul_5136  short-chain dehydrogenase/reductase SDR  34.53 
 
 
254 aa  134  9.999999999999999e-31  Caulobacter sp. K31  Bacteria  normal  0.708802  normal 
 
 
-
 
NC_013526  Tter_1966  short-chain dehydrogenase/reductase SDR  36.33 
 
 
254 aa  135  9.999999999999999e-31  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_1110  3-oxoacyl-(acyl-carrier-protein) reductase  36 
 
 
246 aa  135  9.999999999999999e-31  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_1396  short chain dehydrogenase  35.61 
 
 
253 aa  134  1.9999999999999998e-30  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_3894  short chain dehydrogenase  35.25 
 
 
253 aa  134  1.9999999999999998e-30  Pseudomonas putida F1  Bacteria  normal  0.933722  normal  0.0806905 
 
 
-
 
NC_009439  Pmen_2680  short chain dehydrogenase  35.97 
 
 
253 aa  134  1.9999999999999998e-30  Pseudomonas mendocina ymp  Bacteria  normal  0.313407  normal  0.819387 
 
 
-
 
NC_009486  Tpet_1020  3-oxoacyl-(acyl-carrier-protein) reductase  35.64 
 
 
246 aa  133  3.9999999999999996e-30  Thermotoga petrophila RKU-1  Bacteria  normal  0.0122832  n/a   
 
 
-
 
NC_013440  Hoch_4406  short-chain dehydrogenase/reductase SDR  35.97 
 
 
253 aa  133  5e-30  Haliangium ochraceum DSM 14365  Bacteria  normal  0.410481  normal 
 
 
-
 
NC_010320  Teth514_1783  3-ketoacyl-(acyl-carrier-protein) reductase  30.42 
 
 
255 aa  132  5e-30  Thermoanaerobacter sp. X514  Bacteria  decreased coverage  0.000332127  n/a   
 
 
-
 
NC_009719  Plav_0548  short-chain dehydrogenase/reductase SDR  35.66 
 
 
261 aa  132  5e-30  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5463  Short-chain dehydrogenase/reductase SDR  34.86 
 
 
251 aa  132  7.999999999999999e-30  Ralstonia eutropha JMP134  Bacteria  normal  0.230582  n/a   
 
 
-
 
NC_011831  Cagg_1619  short-chain dehydrogenase/reductase SDR  35.97 
 
 
253 aa  132  7.999999999999999e-30  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.901509  normal  0.0346671 
 
 
-
 
NC_010501  PputW619_1425  short chain dehydrogenase  35.25 
 
 
253 aa  132  7.999999999999999e-30  Pseudomonas putida W619  Bacteria  normal  0.857979  normal  0.357324 
 
 
-
 
NC_010581  Bind_1760  short-chain dehydrogenase/reductase SDR  40.48 
 
 
255 aa  132  9e-30  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.233538  normal 
 
 
-
 
NC_007355  Mbar_A0777  2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase  35.11 
 
 
256 aa  131  1.0000000000000001e-29  Methanosarcina barkeri str. Fusaro  Archaea  normal  unclonable  0.000000000602932 
 
 
-
 
NC_009921  Franean1_0515  short-chain dehydrogenase/reductase SDR  35.61 
 
 
249 aa  131  1.0000000000000001e-29  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_008347  Mmar10_2657  short-chain dehydrogenase/reductase SDR  37.1 
 
 
276 aa  131  1.0000000000000001e-29  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_2100  short-chain dehydrogenase/reductase SDR  36.4 
 
 
250 aa  131  1.0000000000000001e-29  Acidovorax sp. JS42  Bacteria  normal  0.0527344  normal 
 
 
-
 
NC_011884  Cyan7425_1963  short-chain dehydrogenase/reductase SDR  36.08 
 
 
257 aa  130  2.0000000000000002e-29  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.922459 
 
 
-
 
NC_011004  Rpal_0113  short-chain dehydrogenase/reductase SDR  36.49 
 
 
262 aa  130  2.0000000000000002e-29  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.351696  n/a   
 
 
-
 
NC_008392  Bamb_6220  short-chain dehydrogenase/reductase SDR  34.89 
 
 
252 aa  130  2.0000000000000002e-29  Burkholderia ambifaria AMMD  Bacteria  normal  0.621886  normal 
 
 
-
 
NC_010172  Mext_1326  short-chain dehydrogenase/reductase SDR  35.82 
 
 
254 aa  130  2.0000000000000002e-29  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.393683 
 
 
-
 
NC_007509  Bcep18194_C7160  Short-chain dehydrogenase/reductase SDR  41.58 
 
 
252 aa  130  3e-29  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_3027  Short-chain dehydrogenase/reductase  36.4 
 
 
259 aa  130  3e-29  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.730472  normal 
 
 
-
 
NC_009441  Fjoh_0075  short-chain dehydrogenase/reductase SDR  32.86 
 
 
250 aa  129  6e-29  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_3295  short-chain dehydrogenase/reductase SDR  40.5 
 
 
246 aa  128  1.0000000000000001e-28  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009717  Xaut_5049  short-chain dehydrogenase/reductase SDR  33.92 
 
 
250 aa  128  1.0000000000000001e-28  Xanthobacter autotrophicus Py2  Bacteria  normal  0.553116  normal  0.644711 
 
 
-
 
NC_007413  Ava_1863  glucose 1-dehydrogenase  34.41 
 
 
269 aa  128  1.0000000000000001e-28  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_1526  short-chain dehydrogenase/reductase SDR  35.46 
 
 
254 aa  128  1.0000000000000001e-28  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_2067  short-chain dehydrogenase/reductase SDR  32.14 
 
 
253 aa  128  1.0000000000000001e-28  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_2723  short-chain dehydrogenase/reductase SDR  35.13 
 
 
251 aa  127  2.0000000000000002e-28  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B1174  Short-chain dehydrogenase/reductase SDR  41.8 
 
 
252 aa  127  2.0000000000000002e-28  Burkholderia sp. 383  Bacteria  normal  normal  0.252044 
 
 
-
 
NC_007778  RPB_4257  Short-chain dehydrogenase/reductase SDR  37.91 
 
 
262 aa  127  2.0000000000000002e-28  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0797349  normal 
 
 
-
 
NC_007950  Bpro_5564  short-chain dehydrogenase/reductase SDR  34.05 
 
 
250 aa  127  2.0000000000000002e-28  Polaromonas sp. JS666  Bacteria  normal  0.0387947  normal 
 
 
-
 
NC_008391  Bamb_3260  short-chain dehydrogenase/reductase SDR  37.24 
 
 
255 aa  127  2.0000000000000002e-28  Burkholderia ambifaria AMMD  Bacteria  decreased coverage  0.00276657  normal  0.102342 
 
 
-
 
NC_008688  Pden_4584  short chain dehydrogenase  37.23 
 
 
252 aa  127  2.0000000000000002e-28  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.170316 
 
 
-
 
NC_009953  Sare_3002  short-chain dehydrogenase/reductase SDR  34.72 
 
 
266 aa  127  2.0000000000000002e-28  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.00000526062 
 
 
-
 
NC_013595  Sros_7696  short-chain dehydrogenase/reductase SDR  38.43 
 
 
251 aa  127  3e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  0.984897  normal  0.462493 
 
 
-
 
NC_009487  SaurJH9_2499  short chain dehydrogenase  33.1 
 
 
272 aa  127  3e-28  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.496805  n/a   
 
 
-
 
NC_008228  Patl_1832  short-chain dehydrogenase/reductase SDR  30.56 
 
 
250 aa  127  3e-28  Pseudoalteromonas atlantica T6c  Bacteria  unclonable  0.0000000715788  n/a   
 
 
-
 
NC_009632  SaurJH1_2549  short chain dehydrogenase  33.1 
 
 
272 aa  127  3e-28  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_4926  short-chain dehydrogenase/reductase SDR  38.12 
 
 
250 aa  126  6e-28  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_009672  Oant_4849  short-chain dehydrogenase/reductase SDR  35 
 
 
254 aa  125  7e-28  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_1771  short-chain dehydrogenase/reductase SDR  32.04 
 
 
252 aa  125  8.000000000000001e-28  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_1760  short-chain dehydrogenase/reductase SDR  33.81 
 
 
250 aa  125  8.000000000000001e-28  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.141854 
 
 
-
 
NC_013739  Cwoe_2339  short-chain dehydrogenase/reductase SDR  40.21 
 
 
251 aa  125  9e-28  Conexibacter woesei DSM 14684  Bacteria  normal  0.195862  normal  0.0790399 
 
 
-
 
NC_003910  CPS_1175  short chain dehydrogenase/reductase family oxidoreductase  30.56 
 
 
241 aa  124  1e-27  Colwellia psychrerythraea 34H  Bacteria  normal  0.267366  n/a   
 
 
-
 
NC_011892  Mnod_8330  short-chain dehydrogenase/reductase SDR  39.11 
 
 
255 aa  124  1e-27  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2863  short-chain dehydrogenase/reductase SDR  30.22 
 
 
248 aa  125  1e-27  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_6823  short-chain dehydrogenase/reductase SDR  33.93 
 
 
258 aa  125  1e-27  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_0677  short-chain dehydrogenase/reductase SDR  34.28 
 
 
270 aa  124  2e-27  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_1056  oxidoreductase, short chain dehydrogenase/reductase family  34.6 
 
 
254 aa  124  2e-27  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_0642  short-chain dehydrogenase/reductase SDR  32.63 
 
 
252 aa  124  2e-27  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.220005 
 
 
-
 
NC_008148  Rxyl_0541  short-chain dehydrogenase/reductase SDR  35.21 
 
 
251 aa  124  2e-27  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_4671  short-chain dehydrogenase/reductase SDR  34.27 
 
 
283 aa  124  2e-27  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_2059  short-chain dehydrogenase/reductase SDR  36.4 
 
 
252 aa  124  2e-27  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_0321  short-chain dehydrogenase/reductase SDR  33.8 
 
 
254 aa  123  3e-27  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_2421  short-chain dehydrogenase/reductase SDR  32.51 
 
 
259 aa  123  3e-27  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0231267 
 
 
-
 
NC_009717  Xaut_4868  short-chain dehydrogenase/reductase SDR  35.94 
 
 
250 aa  123  3e-27  Xanthobacter autotrophicus Py2  Bacteria  normal  0.758731  normal  0.103076 
 
 
-
 
NC_009921  Franean1_3710  short-chain dehydrogenase/reductase SDR  35.61 
 
 
262 aa  124  3e-27  Frankia sp. EAN1pec  Bacteria  normal  0.583089  normal 
 
 
-
 
NC_011884  Cyan7425_1811  short-chain dehydrogenase/reductase SDR  34.64 
 
 
268 aa  124  3e-27  Cyanothece sp. PCC 7425  Bacteria  normal  0.271129  normal 
 
 
-
 
NC_008148  Rxyl_3046  short-chain dehydrogenase/reductase SDR  35.48 
 
 
252 aa  123  4e-27  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_2262  short-chain dehydrogenase/reductase SDR  34.95 
 
 
261 aa  122  5e-27  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A2879  putative alcohol dehydrogenase, zinc-independent  31.77 
 
 
265 aa  122  5e-27  Burkholderia xenovorans LB400  Bacteria  normal  0.575303  normal  0.558378 
 
 
-
 
NC_013525  Tter_0268  short-chain dehydrogenase/reductase SDR  34.04 
 
 
250 aa  123  5e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007511  Bcep18194_B1012  Short-chain dehydrogenase/reductase SDR  34.89 
 
 
251 aa  122  6e-27  Burkholderia sp. 383  Bacteria  normal  0.0198691  normal  0.370278 
 
 
-
 
NC_007925  RPC_3480  short-chain dehydrogenase/reductase SDR  34.51 
 
 
281 aa  122  6e-27  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.223454  normal 
 
 
-
 
NC_007952  Bxe_B0264  putative short-chain dehydrogenase  36.56 
 
 
262 aa  122  6e-27  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_5100  putative short-chain dehydrogenase/reductase SDR family protein  34.27 
 
 
261 aa  122  7e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.917841  normal  0.678944 
 
 
-
 
NC_014158  Tpau_3804  short-chain dehydrogenase/reductase SDR  44.57 
 
 
253 aa  122  7e-27  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_3707  short-chain dehydrogenase/reductase SDR  34.95 
 
 
261 aa  122  7e-27  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.372057  n/a   
 
 
-
 
NC_011757  Mchl_1137  short-chain dehydrogenase/reductase SDR  34.04 
 
 
255 aa  122  8e-27  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.420878 
 
 
-
 
NC_011737  PCC7424_5536  short-chain dehydrogenase/reductase SDR  32.51 
 
 
254 aa  122  9e-27  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0819159 
 
 
-
 
NC_013743  Htur_2798  short-chain dehydrogenase/reductase SDR  34.4 
 
 
256 aa  122  9e-27  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_009921  Franean1_3173  short-chain dehydrogenase/reductase SDR  36.82 
 
 
245 aa  122  9e-27  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_1552  short-chain dehydrogenase/reductase SDR  33.94 
 
 
248 aa  121  9.999999999999999e-27  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0714452  normal 
 
 
-
 
NC_011365  Gdia_0891  short-chain dehydrogenase/reductase SDR  35.36 
 
 
260 aa  122  9.999999999999999e-27  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal  0.375615 
 
 
-
 
NC_007412  Ava_C0109  short chain dehydrogenase  41.24 
 
 
251 aa  121  9.999999999999999e-27  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_1352  short-chain dehydrogenase/reductase SDR  34.67 
 
 
282 aa  121  9.999999999999999e-27  Methylobacterium extorquens PA1  Bacteria  normal  0.316546  normal  0.241504 
 
 
-
 
NC_009921  Franean1_6910  short-chain dehydrogenase/reductase SDR  36.07 
 
 
262 aa  121  9.999999999999999e-27  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009051  Memar_0926  short-chain dehydrogenase/reductase SDR  34.39 
 
 
249 aa  121  9.999999999999999e-27  Methanoculleus marisnigri JR1  Archaea  normal  0.598625  n/a   
 
 
-
 
NC_009921  Franean1_0924  short-chain dehydrogenase/reductase SDR  43.68 
 
 
321 aa  121  9.999999999999999e-27  Frankia sp. EAN1pec  Bacteria  decreased coverage  0.00780913  normal  0.965318 
 
 
-
 
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