| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1832 |
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| Symbol | |
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| ID | 4173017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2206622 |
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| End bp | 2207374 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638054841 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_661406 |
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| Protein GI | 109898151 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000715788 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAGCA CAACACAGCC CATTTGTATT GTCACCGGTG GTAGCTTAGG GATAGGCGCT
GCCATTTGTC AGCTATTTGC CCAAAAAGGC TACCGAGTAT TTAATTTAGA TTTACAGGCC
CCACCTCAGC CTGATGTCGC TGTTCATTGG CATCAATGCG ATGTATCAAA CGTGACACAA
GTGAGAAATA TTATTGCCAG TATCCGCAGT GAACATTCAA AAATTGACTG CTTGGTGTCT
AACGCTGGCG TGCATCTGTC CGCCAATATC GAGCAAACCA GTGAAGACGT GCTTGACCAG
ATGTTTGCGA TTAATGTCAA AGGGGCTTAC GCCGCCATTC AAGGCGTGCT GCCAAGCATG
GTTAAGCATG GTGGCGGTTC CATTATTTTA ATGGCCTCTG ATCAAGCGCT AATTGCCAAG
CAAAATTCTT TTGCATATAA CTTGACCAAA TCCGCTTTGG CATCAATGGC AAAAACGACC
GCGCTGGATT ATGCCAAATA CAATATTCGC GCGAATGCAG TATGCCCAGG GACAATAGAA
ACCCCTCTGT ATCATAAAGC AATTGATAGT TACCTTGAAA AGTCAGGGCG CGATAGTGAC
GAAGTACACG CAGAAGAAGC CGCGTTGCAA CCTCTTGGGC GTCTAGGCCA GCCAAACGAA
GTGGCGCAGC TTTGTTACTT TTTAGCAAGT GAACAGGCGG GTTTTATCAC CGGTAGTTTG
CAAGTCATCG ATGGCGGTTA TACCGCCCAG TAG
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| Protein sequence | MSSTTQPICI VTGGSLGIGA AICQLFAQKG YRVFNLDLQA PPQPDVAVHW HQCDVSNVTQ
VRNIIASIRS EHSKIDCLVS NAGVHLSANI EQTSEDVLDQ MFAINVKGAY AAIQGVLPSM
VKHGGGSIIL MASDQALIAK QNSFAYNLTK SALASMAKTT ALDYAKYNIR ANAVCPGTIE
TPLYHKAIDS YLEKSGRDSD EVHAEEAALQ PLGRLGQPNE VAQLCYFLAS EQAGFITGSL
QVIDGGYTAQ
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