| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3173 |
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| Symbol | |
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| ID | 5671550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 3738510 |
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| End bp | 3739247 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641242068 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001507488 |
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| Protein GI | 158314980 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGGCGAC TTGAGGACAA GGTCACTATC GTCACAGGCG CTGGGTCCGG TATCGGCAAG
GCGGCGGCGC TGCTGTTCGC CCAGGAGGGC GCCAAGGTCG TCTGCGCCGA CATGAACGGT
TCGGAGAAGG ACACTGCCGC CGAGATCGGC CCGAACGCGG TGGCGGTGCA GGTGGACGTC
GCTGTGGGCG CGCAGGTCGA GAACATGGTC GACACCGCGG TGCGCGAGTT CGGCAAGCTC
GACGTGCTCT ACAACAACGC CGGTATCTCC GGCTCGTTTG GCCCGATCCA CGAGCTCGAC
GAGGAGACGC TCGACCGGCT TCTCGCGGTG AACATCAAGG GCGTCTTCTT CGGTATCAAG
TACGCCGTTC CGGTGATGCT GGCCAACGGC GGCGGCTCGA TAATCAACAC CGCCTCGAAC
GCCGGGATGG TTGGATGGAA GCACAAGGCC GGGTACTCCG CAGCCAAGGG CGGCGTCGTC
CTGTTGACGA AGTCTGCGGC CCTCGACTAC GCGAAGTCCG GTATCCGGGT GAACGCAGTC
TGCCCCGGCA TGACGTGGAC GGGCCTGGCC GCCGCGCAGG CGCCCGCGCC GCCGGAGGAC
CTCAAGGTGC CGAACCCGAT GGCCCGCTTC GCCAAGCCCA GCGAGCTCGC CGCCGCCGCC
CTGTTCCTCG CCAGCGACGA GTCGTCCTTC GTCACCGGCG TGGCGATGCC GGTCGACGGT
GGCTACGTCG CGCGCTGA
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| Protein sequence | MGRLEDKVTI VTGAGSGIGK AAALLFAQEG AKVVCADMNG SEKDTAAEIG PNAVAVQVDV
AVGAQVENMV DTAVREFGKL DVLYNNAGIS GSFGPIHELD EETLDRLLAV NIKGVFFGIK
YAVPVMLANG GGSIINTASN AGMVGWKHKA GYSAAKGGVV LLTKSAALDY AKSGIRVNAV
CPGMTWTGLA AAQAPAPPED LKVPNPMARF AKPSELAAAA LFLASDESSF VTGVAMPVDG
GYVAR
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