| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_1811 |
|---|
| Symbol | |
|---|
| ID | 7287735 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | + |
|---|
| Start bp | 1679296 |
|---|
| End bp | 1680102 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 643584809 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_002482539 |
|---|
| Protein GI | 220907228 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.271129 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACT TAACCGGCAA AAATGCCTTA ATTACGGGAG CCAGTTCTGG GATTGGCCAG
GCGATCGCGA TACGGTTGGC TGAGGAAGGC TGTAATGTTG CCATAAATTA CCGCAGCAAA
CCAGAGGAAG CCCAGCGCAC CGAGACGATC GCCCTAGACC AGGCCACCGT AGCCGGCCAT
GGCGAAATCA AAACCGTGTT AGTCCAGGGA GATGTCTCAA AAGAAGAAGA TATTATTCGT
GCCATCAATA CCACAGTTGA AACGTTTGGT GGGCTAGATC TCTTGATTAA CAATGCTGGA
ATTCAGACCG AGTTCATCTC CCATGAAATT CCTACCGATA AGTTTGATCA GGTGATCGCA
GTGAATCTAC GGGGAGCTTT TCTATGTGCT AGAGAAGCAA TTAAGTACTG GATTTCTCAA
CAATGCCCCG GTGTAATTAT CAATGTTTCC AGTGTGCATG AAGTGATTCC CCGCCCTCTC
TATCTCAGCT ATTCAATCAG CAAAGGCGGG ATGGGCAACC TGACCAAAAC CCTGGCCCTG
GAGTATGCCA ATCGCGGCAT TCGAGTCAAT GCGATCGCCC CCGGAGCCAC CGCCACCCCA
ATCAACGAAG CCTGGACAGA GGATCTAGAA AAACGAGCCG TCGTGGAAAG CCACATTCCC
ATGGGCCGGG CAGGAACCTC AGCAGAAATG GCCGCTGCAG TCGCGTTTCT GGCATCAGAT
GAAGCCGCCT ACATTACCGG ACAAACCCTG TTTATCGATG GTGGGCTCAC ACTTTACGCA
GATTTCCGCG AAGCCTGGTC CGCCTGA
|
|---|
| Protein sequence | MKNLTGKNAL ITGASSGIGQ AIAIRLAEEG CNVAINYRSK PEEAQRTETI ALDQATVAGH
GEIKTVLVQG DVSKEEDIIR AINTTVETFG GLDLLINNAG IQTEFISHEI PTDKFDQVIA
VNLRGAFLCA REAIKYWISQ QCPGVIINVS SVHEVIPRPL YLSYSISKGG MGNLTKTLAL
EYANRGIRVN AIAPGATATP INEAWTEDLE KRAVVESHIP MGRAGTSAEM AAAVAFLASD
EAAYITGQTL FIDGGLTLYA DFREAWSA
|
|---|
| |