| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1547 |
|---|
| Symbol | |
|---|
| ID | 9155697 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 1617015 |
|---|
| End bp | 1617824 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_003646508 |
|---|
| Protein GI | 296139265 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.255418 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCACGA TCGAACAACC CCTCCTCAAC ACGGTGGAGC ACCTAGGGCT GGCCGGCAAG
ACCGTGCTCA TCACCGGTGC GACAGCCGGA ATCGGCCGAG CGGCGGTCGA CCGTTTCGCC
GCCGCAGGCG CCAATGTCGT CGCCACCGGA CGGGCCGAGG CGGGACTCGG GGCGATCATC
GAGGCGTCGC GCCAGCACCC GGCGGGGGCC GGACAAGTGC GGGTCGTGCG CTGCGACGTG
GCGTGCGACG ACGACGTCGC GCACGCGGTG GGCTACGCGG TGGCCGAGTT CGGTTCCCTC
GACGTGGCGT TCAACAACGC CGGCACCTTC GGCCGATTCG CGCCGATTCA CCAGGACGAC
GAGGCCAATT TCGACACCGT GATCGGGACC AACCTGCGAG GGGTCTGGTC CTGCATGCGG
CACGAGGTCA CTGCGATGCT CGCGAACGGT GGCGGCTCGA TCGTCAACAC CGCCTCGGTA
GCCGCACACC TCGGGCACGC GAAGAGCGCC CTGTACTCGG CTACCAAACA CGCGATCCTT
GGATTGACCA AGTCCGTCGC GCTCCAATAC GCGGACCAGG GCATCCGGGT CAACGTGCTC
AGCCCGGGCT CCACGGACAC CGAGATGCTG CGGTCGATCT ACCCGGACGC GGAGACGATC
AACGCGCGGA AGCGCCGAGC CCCGATGCGG CGCCTCGGCG AGCCGACCGA GCTCGCCGAC
GCGGCACTGT TCCTCGCCAG CCCGTTCAGC GCCTATGTGA CGGGCCAGGC GCTCGTCGCC
GACGGCGGCG TCATCGCCGG ATCGGCCTGA
|
|---|
| Protein sequence | MTTIEQPLLN TVEHLGLAGK TVLITGATAG IGRAAVDRFA AAGANVVATG RAEAGLGAII
EASRQHPAGA GQVRVVRCDV ACDDDVAHAV GYAVAEFGSL DVAFNNAGTF GRFAPIHQDD
EANFDTVIGT NLRGVWSCMR HEVTAMLANG GGSIVNTASV AAHLGHAKSA LYSATKHAIL
GLTKSVALQY ADQGIRVNVL SPGSTDTEML RSIYPDAETI NARKRRAPMR RLGEPTELAD
AALFLASPFS AYVTGQALVA DGGVIAGSA
|
|---|
| |