| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1326 |
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| Symbol | |
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| ID | 5832046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 1471094 |
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| End bp | 1471858 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641367119 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001638798 |
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| Protein GI | 163850755 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.393683 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGGT TCAGCGGCAA GGTGGTGATC GTGACGGGAT CAGGCTCCGG CATCGGGGCG
GCGACGGCAC GGCGCTTCGC GCAGGACGGC GCATCGGTCG TACTCAACGG CCGCACGCGG
GAGAAGCTTG AGCGCGTCAC CGCCGATCTC GAACCGGATC GCGTCCTGGT GCAGACCGGC
GACGTGTCCG ATCAGGGTGA TGCCGAGGCT CTGATCGCCG CCGCGGTCGA GCGCTTCGGC
CGGCTCGACA TCCTCGTCAA CAATGCCGGC GTCGTTCCGA CCGGCCCGCT CCTTGAGGCG
TCCGTCGCCG ATTGGCGCAA GGTCATGGCC ATCGACGTGG ACGGCGTGTT TTTCTGCACG
CGCGCCGCCC TGCCGCACCT GATCCGGAGC GGCGGCAATA TCGTCAACGT CTCGTCCGTA
TCGGGGCTCG GCGGCGACTG GAACATGAGC TTCTACAACG CGGCCAAGGG TGCGGTGTCG
AACTTCACGC GCTCGCTGGC GCTTGAACTC GGCGAGAGAG GCGTGCGGGT CAACGCGGTC
AATCCCGGCC TGACCTTCAC CGACCTGACC GAGGACATGA AGGGCGATGT GGGCCTGATG
AAGCGCTTCG CGGAGCGGAT CCCCCTCGGC CGTGGGGCCG AACCCGATGA GGTCGCCGAC
GTAATCGCCT TCCTGGCGAG CGAGGATGCG CGCTACGTCA CCGGCGTGAA CCTGCCGGTG
GATGGCGGCC TCACGGCATC GAACGGGCAG CCGAAACAGG CCTGA
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| Protein sequence | MTRFSGKVVI VTGSGSGIGA ATARRFAQDG ASVVLNGRTR EKLERVTADL EPDRVLVQTG
DVSDQGDAEA LIAAAVERFG RLDILVNNAG VVPTGPLLEA SVADWRKVMA IDVDGVFFCT
RAALPHLIRS GGNIVNVSSV SGLGGDWNMS FYNAAKGAVS NFTRSLALEL GERGVRVNAV
NPGLTFTDLT EDMKGDVGLM KRFAERIPLG RGAEPDEVAD VIAFLASEDA RYVTGVNLPV
DGGLTASNGQ PKQA
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