Gene Fjoh_4926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_4926 
Symbol 
ID5094196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp5945673 
End bp5946425 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content35% 
IMG OID644744349 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001197244 
Protein GI146302653 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATT TAGAAAACAA AGTAGCTATT GTAACAGGTG GAAATAGTGG AATTGGGTAC 
GCTGCTGCTG CCGAATTAGC ATCAAAAGGT GCAAAAGTAA TTGTAACAGG AAGAAACAAA
GAAGCTTTGG CAAAAGCTGA AACTGAATTA AATGTTACCG GAATTGTGGC AGATCAATCT
GATTTAAAAT CTATTGACAA TTTAGTAGAA GAAGTAAAAG CAAAATTCGG GAAAGTTGAT
ATTTTATTCC TGAATGCAGG AATTGCTGCT TTTGCTCCGG TAGACTCAGC TTCAGAAGAA
CATTATGACA GTATAATGAA TGTAAACGTA AAAGGAGTTT ATTTTACAGT TCAAAAAGTA
CTGCCAATTT TAAATGACGG AGGTTCTATT ATTTTTAATA CTTCTGTAAA TGCTCAATTA
GGAATGCCGG GTTCAAGTGT ATATGGAGCA AGTAAAGCAG CAGTTTTATC ATTAAACAGA
ATATTTGCTG CCGAATTAGC TTCAAGAAAA ATCAGAGTTA ATGCAGTTTC TCCTGGCCCA
ATCGAAACTC CTTTGTATGG TAAAGTAGGT TTAGAAAAAG AAGAAGTAGA AGGTTTAGGA
GCAGCTTTGG GAGAAAAAAT CTTATTGAAA CGTTTTGGTC AGGCTTCTGA AGTTGCAAAA
ACAATTAGTT TTCTTGCTTC TGATGATTCA TCATTCATTA CAGGAACAGA AATTGTTGTC
GACGGCGGAC TTACTGTAAA TACAGTATTA TAA
 
Protein sequence
MKNLENKVAI VTGGNSGIGY AAAAELASKG AKVIVTGRNK EALAKAETEL NVTGIVADQS 
DLKSIDNLVE EVKAKFGKVD ILFLNAGIAA FAPVDSASEE HYDSIMNVNV KGVYFTVQKV
LPILNDGGSI IFNTSVNAQL GMPGSSVYGA SKAAVLSLNR IFAAELASRK IRVNAVSPGP
IETPLYGKVG LEKEEVEGLG AALGEKILLK RFGQASEVAK TISFLASDDS SFITGTEIVV
DGGLTVNTVL