| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1175 |
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| Symbol | |
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| ID | 3518583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 1198691 |
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| End bp | 1199416 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637283639 |
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| Product | short chain dehydrogenase/reductase family oxidoreductase |
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| Protein accession | YP_267918 |
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| Protein GI | 71278813 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.267366 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAAG TGTGTGTAAT CACCGGTGGA AGCTCTGGCA TTGGTTTAAG TATTGTAAAA
TTATTCATCA AGAATAATTA CCAAGTCTTT AATTTAGATT TGTCCCCTTC TGCTGAAGGA
GATTTTCGCC AGTGTGATGT TACTAACGTT AGCCAGGTAA CCGAGATAAT TAATGATATT
ACTAAGCAAC ACACCATAGA TGTTCTAATT TCAAATGCCG GTATTCACTT TTCAGCCACG
ATTGAAAATA CCAGTGAAGC TGATCTAGAT ACAGTATTTA ACATTAATGT TAAAGGTGCT
TATGCTGCAA TCAAAGCGGT GTTACCATCA ATGAAAGCTA ACAAAAATGG GTCGATTTTG
TTGATGGCTT CTGATCAAGC ATTAATCGCC AAGCATAATT CGTTTGCGTA TAACTTAAGT
AAAAGTGCCC TCGCCTCTAT CGCTAAAACA ACAGCGCTTG ATTACGCCGC TTTTAATATT
AGAGCTAATG CCGTTTGCCC GGGTACCATT GAAACACCGC TGTACCACAA AGCCATTGAT
AACTATTGTC AGCAATCAGG TGCTGATAAA AGCGAAGTGC ATAGGGATGA AGAGAAGTTG
CAACCTTTGC AACGCTTAGG TCAACCAGAA GAAGTTGCTG AGTTAGTACT ATTTTTAGCA
TCAGATAAAG CTAAGTTTAT CACCGGTAGT TTACAAGTGA TCGACGGCGG TTATACCGCA
CAATAG
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| Protein sequence | MKKVCVITGG SSGIGLSIVK LFIKNNYQVF NLDLSPSAEG DFRQCDVTNV SQVTEIINDI
TKQHTIDVLI SNAGIHFSAT IENTSEADLD TVFNINVKGA YAAIKAVLPS MKANKNGSIL
LMASDQALIA KHNSFAYNLS KSALASIAKT TALDYAAFNI RANAVCPGTI ETPLYHKAID
NYCQQSGADK SEVHRDEEKL QPLQRLGQPE EVAELVLFLA SDKAKFITGS LQVIDGGYTA
Q
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