| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1425 |
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| Symbol | |
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| ID | 6110353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 1565128 |
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| End bp | 1565889 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641621199 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001748299 |
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| Protein GI | 170720611 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.857979 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.357324 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATGA CCTTTTCCGG CCAGGTAGCA CTGGTCACTG GCGGTGCGGC GGGTATCGGC
CGGGCGACGG CACTGGCGTT TGCCCGTGAG GGCCTCAAAG TGGTGGTGGC CGACCTCGAC
CCGGTCGGTG GAGAGGGCAC CGTGGCGTTG ATCAAAGATG CCGGTGGCCA GGCGCTGTTC
GTGGCCTGTG ATGTGACCCG TGACGCTGAT GTGCGCCGGC TGCATGAGCA GGTCATCCAG
GCCTACGGTC GCCTGGACTA TGCCTACAAC AATGCCGGTA TCGAAATCGA GCAGGGCCGC
CTGGCTGAGG GCAGCGAGGC TGAGTTCGAC GCCATCATGG GCGTCAACGT CAAAGGGGTG
TGGCTGTGCA TGAAGTACCA GCTGCCGCTG TTGCTGGCCC AGGGCGGCGG GGCGATCGTC
AATACTGCCT CGGTGGCAGG CTTGGGCGCG GCGCCGAAGA TGAGCATCTA CAGCGCGTCC
AAGCACGCGG TGATCGGCCT GACCAAATCG GCGGCCATCG AATATGCCAA GAAGCGCATC
CGGGTGAATG CGGTGTGCCC AGCGGTGATC GATACCGACA TGTTCCGCCG CGCCTACGAG
GCCGACCCAC GCAAGGCCGA GTTCGCCGCC GCGATGCACC CGGTCGGGCG CATCGGCAAG
GTCGAGGAAA TCGCCAGTGC GGTGTTGTAC CTGTGCAGTG ATGGAGCTGC GTTCACTACC
GGGCACAGCC TTACGGTGGA CGGTGGGGCC ACGGCTATTT GA
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| Protein sequence | MSMTFSGQVA LVTGGAAGIG RATALAFARE GLKVVVADLD PVGGEGTVAL IKDAGGQALF
VACDVTRDAD VRRLHEQVIQ AYGRLDYAYN NAGIEIEQGR LAEGSEAEFD AIMGVNVKGV
WLCMKYQLPL LLAQGGGAIV NTASVAGLGA APKMSIYSAS KHAVIGLTKS AAIEYAKKRI
RVNAVCPAVI DTDMFRRAYE ADPRKAEFAA AMHPVGRIGK VEEIASAVLY LCSDGAAFTT
GHSLTVDGGA TAI
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