| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3295 |
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| Symbol | |
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| ID | 5671667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 3906056 |
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| End bp | 3906796 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641242184 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001507604 |
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| Protein GI | 158315096 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAAGC TGGACGGAAA AGTTGCTGTT ATCACCGGGG CCGGCTCGGG CATCGGGCGG
TCGGCGGCGT TCCTGTTCGC CCGGGAGGGC GCGCGCGTCG TCTGTGCCGA CGTGAGTGGC
CGCGAGGCGC TCACCGCGAA GGCGGTCGGG GACGGGGCGA TCGCGGTTCA CGTCGACGTG
ACGTCGACCG AAGACATCGA GCGCATGATA ACGACCGCCG TCGATCGGTT CGGCAAGCTC
GACGTGTTGT ATAACAACGC GGGCTTCACG GGGCCGATCG TCCCGCTGGC CGAGGCGGGG
GAGGACTACT TCGACGCGGT AATGGCGGTC AATGTCAAGG GCGTCTATCT CGGGATGAAG
GCGGCGATCC CGGTGATGCT GGCCGGCGGT GGAGGGTCGA TCATCAACAC GGCGTCGGCG
GCTGGGTTGG TCGGCTGGAA GGGCCTCGCG GTGTATGCCG CGACGAAGGG CGCCGTCGTG
CAACTGACCA GGTCCGCTGC GCTCGACTAC GCGGCCAAGG GGATCCGGGT CAATGCGGTC
TGCCCCGGCG CTACCTGGAC CCGTCAGGCG GACGCCGAGG ACGACTCGCT TCCGCCCGAG
GGTGTCGTTC CCCCGCAGCC GATGAGGCGC TGGGGGATGC CCGACGAGCT TGCCGCCGCC
GCGTTGTTCC TTGCCAGCGA CGACGCCTCG TTCGTGACCG GGGTCGCGCT CCCGGTCGAC
GGCGGTTACG TCGCCCGCTG A
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| Protein sequence | MGKLDGKVAV ITGAGSGIGR SAAFLFAREG ARVVCADVSG REALTAKAVG DGAIAVHVDV
TSTEDIERMI TTAVDRFGKL DVLYNNAGFT GPIVPLAEAG EDYFDAVMAV NVKGVYLGMK
AAIPVMLAGG GGSIINTASA AGLVGWKGLA VYAATKGAVV QLTRSAALDY AAKGIRVNAV
CPGATWTRQA DAEDDSLPPE GVVPPQPMRR WGMPDELAAA ALFLASDDAS FVTGVALPVD
GGYVAR
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