| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_2059 |
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| Symbol | |
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| ID | 5733947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 2570075 |
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| End bp | 2570833 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641279201 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001544828 |
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| Protein GI | 159898581 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCAGT ATGACTTTCG TGGAAAAGTG GCGCTTGTCA CCGGCGGCGC CTCGGGGATT
GGTGCGGCGT GCGTGCATAC CTTTGCGCGT GGCGGCGCGA AGGTCGCGAT TGTTGATCGC
AATCAGGATC TGGGCGCACA AACCGTGGCG GCGGTCCGCG AGGCCGGCGG CGATGCGATC
TTTCTCCCGG TGGATGTCGC CCAATCAGGG GCCGTTGAGG CGATGGTTAC CGACACCATC
ACGGCCTTTG GACAGCTGGA TATTGCGGTC AATAATGCCG GGATCGGCGG CGAGTCTAAT
CCTACCGGCA CCTACAGCAT TGAAGGTTGG CAGACGGTCA TTGATGTGAA CCTCAACGGT
GTCTTCTATT GCATGCGCTA CGAAATTCCA GCCATGCTGG CGCAGGGCGG CGGCGTGATC
GTGAATATGG CCTCGATCCT AGGGACTGTC GGATTTGCGT CCTCCCCAGC CTATGTCGCC
GCCAAGCACG CGGTGGTTGG TCTCACCAAG GCCGCCGCCC TGGACTATGG GCGCCAAGGG
CTGCGGATCA ACTCGGTCGG GCCGGGCTTT ATCAAAACAC CACTGCTTGA CGGTGGCCTG
GACGATCAGA CCCAAACCTA TCTGAGCGGG CTCCACGCCG TCGGACGCAT GGGCGAGTCA
GCGGAAGTCG CGGCGCTGGT CGCCTTTCTC TGCTCCGCTG AGGCCTCATT CCTGACGGGT
GGCTATTATC TGGTCGATGG TGGATACACG GCGCAATAA
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| Protein sequence | MNQYDFRGKV ALVTGGASGI GAACVHTFAR GGAKVAIVDR NQDLGAQTVA AVREAGGDAI
FLPVDVAQSG AVEAMVTDTI TAFGQLDIAV NNAGIGGESN PTGTYSIEGW QTVIDVNLNG
VFYCMRYEIP AMLAQGGGVI VNMASILGTV GFASSPAYVA AKHAVVGLTK AAALDYGRQG
LRINSVGPGF IKTPLLDGGL DDQTQTYLSG LHAVGRMGES AEVAALVAFL CSAEASFLTG
GYYLVDGGYT AQ
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