| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1396 |
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| Symbol | |
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| ID | 5869160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1568374 |
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| End bp | 1569135 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641546499 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001667639 |
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| Protein GI | 167032408 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATGA CCTTTTCTGG CCAGGTAGCC CTGGTGACTG GCGCTGCCGC CGGTATTGGC
CGGGCAACCG CCCTGGCTTT CGCCCGCGAG GGCCTGAAGG TGGTGGTGGC CGACCTTGAC
CCGGTCGGCG GCGAAGCCAC CGTGGCGCTG ATCCACGCGG TGGGCGGCGA GGCGCTTTTC
ATTGCCTGCG ACGTTACCCG CGACAGCGAG GTGCGCCAGT TGCACGAGCG CCTGATAGCC
GCCTATGGTC GGCTGGACTA TGCCTACAAC AATGCCGGGA TCGAAATCGA GCAACACCGG
CTGGCCGAAG GCAGCGAGGC GGAGTTCGAT GCCATCATGG GCGTGAACGT GAAGGGTGTG
TGGTTGTGCA TGAAGTACCA ACTGCCCTTG CTGTTGGCCC AGGGCGGTGG GGTGATCGTC
AACACCGCTT CGGTGGCGGG GCTGGGGGCG GCGCCGAAGA TGAGCATCTA CAGCGCCAGC
AAGCATGCGG TGATCGGTTT GACCAAGTCG GCGGCCATCG AGTACGCCAA GAAGGGCGTC
CGCGTGAACG CTGTGTGCCC GGCGGTGATC GACACCGACA TGTTCCGCCG TGCCTACGAG
GCCGACCCGC GCAAGGCCGA GTTCGCCGCC GCCATGCACC CGGTGGGGCG CATTGGCAAG
GTTGAGGAAA TCGCCAGCGC GGTGCTGTAC CTGTGTAGCG ACGGTGCGGC GTTTACCACC
GGGCATTGCC TGACGGTCGA TGGTGGGGCT ACGGCGATCT GA
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| Protein sequence | MSMTFSGQVA LVTGAAAGIG RATALAFARE GLKVVVADLD PVGGEATVAL IHAVGGEALF
IACDVTRDSE VRQLHERLIA AYGRLDYAYN NAGIEIEQHR LAEGSEAEFD AIMGVNVKGV
WLCMKYQLPL LLAQGGGVIV NTASVAGLGA APKMSIYSAS KHAVIGLTKS AAIEYAKKGV
RVNAVCPAVI DTDMFRRAYE ADPRKAEFAA AMHPVGRIGK VEEIASAVLY LCSDGAAFTT
GHCLTVDGGA TAI
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