| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2067 |
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| Symbol | |
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| ID | 4278979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2450860 |
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| End bp | 2451621 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638134856 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_750751 |
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| Protein GI | 114563238 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCCAT TATTAGACTT TACTGGCAAA GTCGCCGTTA TTACAGGCGC CGCACAAGGT
TTTGGTAAAT TATTGGCCGA AGAGTTAGCC AAACGTGGCG CTAAGTTAGT CATCAGTGAC
ATTAACGAAG CTGGCGTACA TCAAGTGGCC GATGCCATTG CCGCGACAGG TGCAGAAGTG
GTCGCAATGA AATGCGATGT GTCTAAGAAT GAATCCTGTA AAGCCATGGT CGATACTGCA
ATTGAATATT TTGGCCGAGT GGATATTGGT GTTAACAATG CCGGTATCGC ACACGAGTTT
ATGCCGCTGC ACCACATTGA CGAGTCCATT ATGGACAGCC AGTTTGCGAT TAACGTTAAA
GGTGTGCAAT TTGGCATGCG TCACCAAATA CAACAAATGC TTAAACAAGG CGAAGGCGCC
ATCCTCAATG TCAGTTCAAT GGCTGGTTTA GGTGGTGCAG CTCGAGGCAG TGCTTATGCT
ATGGCAAAAC ATGCTGTTAT TGGCTTAACT AAAACCGGTG CAGTGGAATA CGGCCGTGAA
AATATTCGTA TTAATGCAAT ATGCCCATTC TTTACTCTCA CGCCGATGGT GACCAACTTT
GCTGACGAAG AAAAGCAAAA GAAAATGGCC CGTGGCGCGC CAATGAATCG TTTAGCAGAG
CCAAAAGAAA TCGTCGCAGT GATGCTAATG ATGTTATCTC CCGCCAACAC TTATATGACA
GGACAATGCA TTGCCGTTGA TGGCGGCGTG TCAGCATTTT AA
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| Protein sequence | MDPLLDFTGK VAVITGAAQG FGKLLAEELA KRGAKLVISD INEAGVHQVA DAIAATGAEV
VAMKCDVSKN ESCKAMVDTA IEYFGRVDIG VNNAGIAHEF MPLHHIDESI MDSQFAINVK
GVQFGMRHQI QQMLKQGEGA ILNVSSMAGL GGAARGSAYA MAKHAVIGLT KTGAVEYGRE
NIRINAICPF FTLTPMVTNF ADEEKQKKMA RGAPMNRLAE PKEIVAVMLM MLSPANTYMT
GQCIAVDGGV SAF
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