| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0515 |
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| Symbol | |
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| ID | 5668934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 600407 |
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| End bp | 601156 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641239444 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001504882 |
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| Protein GI | 158312374 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGCAA AGCTCGACGG CAAGGTCGCG ATCATCACCG GAGCCGGTTC CGGTATCGGG
CGCGCGAGCG CCCACCTTTT CGCGGCGGAA GGCGCGAAGG TGGTCTGTGC GGACTTCAGC
GGCAAGGAGA AGCGGACGGC CGACGAGATC GGGGCCGCCG CCGTGGCGGT CCACGTCGAC
GTCGCGGTGG CCGCCGACGT CGAGAGGATG GTCGCCACAG CGGAGGACCG GTTCGGCAAG
CTCGACATCC TCTTCAACAA CGCCGGCGTC GCCGGACCCA AGATGCTCAT CACAGAACAG
AAAGAGGAGG ACTTCGACCG CGTCGTCGCG GTGAACCTCA AGGGCGTGTT TCTCGGGATG
AAGTACGGAA TCCCGGCGAT CCTCCGTAAC GGTGGCGGCT CCTTGATCAA CACCGCGTCG
GCGGCCGGGC TGGTCGGGTG GCGGAAGAAC GCCGTCTACG GCGCGTCCAA GGGCGGCGTC
ATCCAGATGA CCAAGGCGGT GGCGCTCGAC TTCGCGGACC GGGGCGTCCG GGTCAACGCC
ATCTGCCCGG GCATGACCTG GACCGGAATG GTCCCAGGAT CAGACGATCT CCTGGAGCCT
CCCGCCAGCG TGCCAGCGCC TCCTCAGCCG ATGAGCCGGT GGGGCCTGCC AAGCGAGCTC
GCGACCGCCG CCCTCTTCCT CGCGAGCGAC GACTCGTCGT TCGTCACCGG CGTCGCCCTT
CCTGTCGACG GGGGCTATGT CGTTGGCTGA
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| Protein sequence | MAAKLDGKVA IITGAGSGIG RASAHLFAAE GAKVVCADFS GKEKRTADEI GAAAVAVHVD
VAVAADVERM VATAEDRFGK LDILFNNAGV AGPKMLITEQ KEEDFDRVVA VNLKGVFLGM
KYGIPAILRN GGGSLINTAS AAGLVGWRKN AVYGASKGGV IQMTKAVALD FADRGVRVNA
ICPGMTWTGM VPGSDDLLEP PASVPAPPQP MSRWGLPSEL ATAALFLASD DSSFVTGVAL
PVDGGYVVG
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