| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B1174 |
|---|
| Symbol | |
|---|
| ID | 3752939 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007511 |
|---|
| Strand | - |
|---|
| Start bp | 1322337 |
|---|
| End bp | 1323095 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637766023 |
|---|
| Product | Short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_371932 |
|---|
| Protein GI | 78062024 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.252044 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCGAA TGCTCGGAAA AATCGTGATC ATCACCGGTG CTGCCAGCGG CATGGGCGCC
GCCAGCGCAC GCCGCCTCGC GCTCGAAGGT GCGAAGGTCC TGGTCACGGA TCTCCGCGAG
GACGGCGCCG CGCAGGTTGC GGCGGAGATT CGGGGGCAAG GCCTGACGGC AGATCACGCG
CGGCTGGACG TCACCCGGGA AGACGACTGG CAGGCGGCCG TCGACAGAAC GCTGACGCAA
TGGGGGCAAG TGAACGTTCT CGTGAACAAC GCGGGATTGC CCGGGACCCC GGAAACCTGG
GACCAGGCCA CCCTCGACGG GCTAAGCCAG TTGATCGCGC TGAACCTCAA TGGCCAGTTC
CTGGGCATCA AGGCGGTCCT GCCCCACATG AAGAAGGCGG GCGGTGGATC GATCGTGAAC
ATGTCGTCGA TCGCCGGGAT GATCTGTTTC CCCAACCTGC ATCCCGGCTA CGGCGCATCG
AAAGGGGCGA ACCGTCTCCT GTCGAAAGGT GCGGCCGTCG ATCTGGCCGC GTTCGGCATT
CGTGTGAACT CCGTGCACCC GGGCCTGATC CAGACCCCGC AGAGCGCGTA TCTGTTCGAG
GATCCCGAGA TCGTCAAGGC CGTGCTGTCC AAGATCCCGC TGTCCCGCCC GGGCAAGCCC
GAGGAAGTCG CGAACGTCGT GCTCTTCCTT GCGAGCGACG AGTCCTCCTA CGTGACGGGT
GCGGAACTGG TCGTCGACGG CGGTTATACG ACGCTCTGA
|
|---|
| Protein sequence | MNRMLGKIVI ITGAASGMGA ASARRLALEG AKVLVTDLRE DGAAQVAAEI RGQGLTADHA
RLDVTREDDW QAAVDRTLTQ WGQVNVLVNN AGLPGTPETW DQATLDGLSQ LIALNLNGQF
LGIKAVLPHM KKAGGGSIVN MSSIAGMICF PNLHPGYGAS KGANRLLSKG AAVDLAAFGI
RVNSVHPGLI QTPQSAYLFE DPEIVKAVLS KIPLSRPGKP EEVANVVLFL ASDESSYVTG
AELVVDGGYT TL
|
|---|
| |