Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B0264 |
Symbol | |
ID | 4009247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | + |
Start bp | 3081678 |
End bp | 3082466 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637952412 |
Product | putative short-chain dehydrogenase |
Protein accession | YP_555032 |
Protein GI | 91779824 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 58 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACACCG AACAGCATCA ACTCGCGTCC TCTCAGGATG CGCCGCTTCC GCCGGTGGTT CTGATCACGG GCGCTCTTGC CGGTATCGGC CGCGCAACGG CACTGGCATT CGCTCGACTA GGCAGTCGCG TCGTGGTCTC CGGGCGCCGT CCTGACGCCG GCGAGGCCTT GGCCGAAGAG CTTCGCGCGC TGGGCGCAGA GGCGCGGTTC GTCGCAGCCG ACGTTCGCAG CGAGGAAGAC GTCAGTAAGC TTGTCGAGCA GGCGGTCGAG AGCTTCGGCC GTCTGGACGT GGCTGTCAAC AACGCGGGCA CCGAAGGAAC CCCTGGCCCG CTGACCGGGC AGACGCTCGA AAGCTACGAT TCGGTGTTTG ATACAAACGT CCGCGGCACC TTGCTTCCAA TGAAGTACGA GCTGCGCGTG ATGCAGCGAC AAGGCTTCGG CAGCATCGTG AACATCTCGT CGACGATGGG GGAACGCGGT GCGGGCAACA TGTCGATATA CGTCGGCAGC AAACACGCGG TCGAGGGAAT CACGAAATCG GCGGCGATCG AAGCCGCGGC GTACGGTGTG AGGGTCAACG CCGTCGCGCC CGGGCCAACA GAGACAGCGA TGCTCGACCG GCTTACGAAC ACGCCCGCTG GCAAGGCCGC CTTTTACGCC ACCGTCCCTC TGCGGCGAGC CGGTACGCCC GAAGAAATCG CCGAGGCTAT CGTGTTTGTC GCCTCAGAGA AGGCCAGCTT CATCACTGGG CAGATCGTTC GGGTCAACGG CGGACGTACA GCGAGCTAG
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Protein sequence | MDTEQHQLAS SQDAPLPPVV LITGALAGIG RATALAFARL GSRVVVSGRR PDAGEALAEE LRALGAEARF VAADVRSEED VSKLVEQAVE SFGRLDVAVN NAGTEGTPGP LTGQTLESYD SVFDTNVRGT LLPMKYELRV MQRQGFGSIV NISSTMGERG AGNMSIYVGS KHAVEGITKS AAIEAAAYGV RVNAVAPGPT ETAMLDRLTN TPAGKAAFYA TVPLRRAGTP EEIAEAIVFV ASEKASFITG QIVRVNGGRT AS
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