Gene Bxe_B0264 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_B0264 
Symbol 
ID4009247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007952 
Strand
Start bp3081678 
End bp3082466 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content64% 
IMG OID637952412 
Productputative short-chain dehydrogenase 
Protein accessionYP_555032 
Protein GI91779824 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACCG AACAGCATCA ACTCGCGTCC TCTCAGGATG CGCCGCTTCC GCCGGTGGTT 
CTGATCACGG GCGCTCTTGC CGGTATCGGC CGCGCAACGG CACTGGCATT CGCTCGACTA
GGCAGTCGCG TCGTGGTCTC CGGGCGCCGT CCTGACGCCG GCGAGGCCTT GGCCGAAGAG
CTTCGCGCGC TGGGCGCAGA GGCGCGGTTC GTCGCAGCCG ACGTTCGCAG CGAGGAAGAC
GTCAGTAAGC TTGTCGAGCA GGCGGTCGAG AGCTTCGGCC GTCTGGACGT GGCTGTCAAC
AACGCGGGCA CCGAAGGAAC CCCTGGCCCG CTGACCGGGC AGACGCTCGA AAGCTACGAT
TCGGTGTTTG ATACAAACGT CCGCGGCACC TTGCTTCCAA TGAAGTACGA GCTGCGCGTG
ATGCAGCGAC AAGGCTTCGG CAGCATCGTG AACATCTCGT CGACGATGGG GGAACGCGGT
GCGGGCAACA TGTCGATATA CGTCGGCAGC AAACACGCGG TCGAGGGAAT CACGAAATCG
GCGGCGATCG AAGCCGCGGC GTACGGTGTG AGGGTCAACG CCGTCGCGCC CGGGCCAACA
GAGACAGCGA TGCTCGACCG GCTTACGAAC ACGCCCGCTG GCAAGGCCGC CTTTTACGCC
ACCGTCCCTC TGCGGCGAGC CGGTACGCCC GAAGAAATCG CCGAGGCTAT CGTGTTTGTC
GCCTCAGAGA AGGCCAGCTT CATCACTGGG CAGATCGTTC GGGTCAACGG CGGACGTACA
GCGAGCTAG
 
Protein sequence
MDTEQHQLAS SQDAPLPPVV LITGALAGIG RATALAFARL GSRVVVSGRR PDAGEALAEE 
LRALGAEARF VAADVRSEED VSKLVEQAVE SFGRLDVAVN NAGTEGTPGP LTGQTLESYD
SVFDTNVRGT LLPMKYELRV MQRQGFGSIV NISSTMGERG AGNMSIYVGS KHAVEGITKS
AAIEAAAYGV RVNAVAPGPT ETAMLDRLTN TPAGKAAFYA TVPLRRAGTP EEIAEAIVFV
ASEKASFITG QIVRVNGGRT AS