| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1551 |
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| Symbol | |
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| ID | 4667852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 1717544 |
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| End bp | 1718356 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639822753 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_969914 |
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| Protein GI | 120610236 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.2513 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.363007 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATCCC CATCTTCGCA GTCCAGTTCC GCCAACCCCT CCGACCCGTC CCGGCGCTTC
GCCGGCAAGG TCGTCATCGT CACCGGGGCG GGCTCCGGCA TCGGTGCCGC CACCGCGCGC
CGCTTCTCGC AGGAAGGGGC GATGGTCGCC ATCGCCGACC TGAGCGACGA CAAGCTCGCC
GCCACGCGCG CCGACCTGCC GGCCGACCGC ACGCTCGCGC ACCCGGCCGA TGTCTCGAAG
TTCGAAGACG TCCAGGCCCT GGTGGATGCC ACGGTCCAGC GCTTCGGCCA CCTCGACGTC
ATGGTGAACA ACGCCGGCAT CGCCGTGCAG GGCAAGGTCA CCGAGGCCAG CCTGGACGAC
TGGCAGCGCG TCCTCGCCAC GAACGTCTCC GGCGTGTTCC ACGGCGCGCG CGCCGCCATG
CCGCACCTGC TGAAGACCCG GGGCTGCATC GTCAACACCT CGTCGGTCTC GGGCCTGGGC
GGCGACTGGG ACATGAGCTT CTACAACACC TCCAAGGGCG CCGTCTCCAA TTTCACGCGC
GCGCTCGCGC TGGACCATGG CAAGGACGGC GTGCGCGTGA ATGCCGTGGC GCCCAGCCTC
ACCTTCACCG GCATGACGGA GGACATCAAG GGCGATCCCG AGCTGCTCGC CAAGTTCGCC
GAACGCATTC CCCTGGGCCG CGGCGCCGAG CCCGAGGAGA TCGCCTCCGT GATCGCATTC
CTCGCGAGCC CGGACGCCGG CTTCGTCACC GGCGTGGTGC TGCCGGTGGA TGGCGGCGTG
TCGGCATCGA ACGGGCAGCC GCCGCAGGGC TGA
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| Protein sequence | MASPSSQSSS ANPSDPSRRF AGKVVIVTGA GSGIGAATAR RFSQEGAMVA IADLSDDKLA
ATRADLPADR TLAHPADVSK FEDVQALVDA TVQRFGHLDV MVNNAGIAVQ GKVTEASLDD
WQRVLATNVS GVFHGARAAM PHLLKTRGCI VNTSSVSGLG GDWDMSFYNT SKGAVSNFTR
ALALDHGKDG VRVNAVAPSL TFTGMTEDIK GDPELLAKFA ERIPLGRGAE PEEIASVIAF
LASPDAGFVT GVVLPVDGGV SASNGQPPQG
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