| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_3046 |
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| Symbol | |
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| ID | 4114846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 3054638 |
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| End bp | 3055396 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638037814 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_645766 |
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| Protein GI | 108805829 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGGCC TGGAAGGCAA GGTGGCGCTC ATAACCGGCG GCGCGACCGG CATAGGGCGA
GCCACGGCCC TGCTCTTCGC CCGGGAGGGC GCCTGCGTGC TCATCGGCGA CATCAACGAG
GAGGGGGCCT CGGAGACGGT CGAGGCCGTG AGGGCAGCGG GGGGAGACGC GGCCTTCCGG
CGCTGCGACG TGAGCGGGGA GGAGGAGATA GCCGCCCTCG TCGCTGCCGC CGGTGAGGAG
TACGGCAGGC TCGACGTAGT CTTCGGGAAC GCCGGGCTGC TCCGTACGAG GCCGCTGGAG
GATCTCTCGA CGAAGGAGTT CGAGCTACAC CTGAGGATAA ACCTGACCGC CAACTTCCTG
CTCACCAAAT ATGCCGCCCC CGTGATGAGG CGGCATGAGG GTGGGTCCAT CATCTTTATG
GCCTCCGCTG GGGGCCTGCG AGGCACGCGC GGCTCCGTCG CCTACAACGC CTCCAAGGGG
GGGCTCGTCA ACATGACCCG CTCGCTGGCC GACGAGCTCG CGCCGCACAA CATCCGGGTC
AACTGCGTGT GTCCCGGGTG GGTGGACACC CCGTTCAACC GCCCGTTCTG GGAGCACGCG
GGGGCGGGCG CCGAGGAGGA GGTTCTGAGG GGCGTCCCGC TCCGCCGGCA GTGCACCCCG
GAGGAGGTCG CGCCCGCGGT CGTCTTCCTC GCGGGAGAAG GAGCGAGCTA CATCACGGGG
GAGGCGCTCG TTATAGACGG TGGGATGCTG GCGACCTGA
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| Protein sequence | MSGLEGKVAL ITGGATGIGR ATALLFAREG ACVLIGDINE EGASETVEAV RAAGGDAAFR
RCDVSGEEEI AALVAAAGEE YGRLDVVFGN AGLLRTRPLE DLSTKEFELH LRINLTANFL
LTKYAAPVMR RHEGGSIIFM ASAGGLRGTR GSVAYNASKG GLVNMTRSLA DELAPHNIRV
NCVCPGWVDT PFNRPFWEHA GAGAEEEVLR GVPLRRQCTP EEVAPAVVFL AGEGASYITG
EALVIDGGML AT
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