| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6823 |
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| Symbol | |
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| ID | 6248349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | + |
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| Start bp | 1446681 |
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| End bp | 1447457 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642598484 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001862886 |
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| Protein GI | 186471568 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACTC ATCGCAAGTG GAACTATGAA GGAAAGGTGG CTTTCGTTAC GGGTGCAGCA
AACGGCATTG GGCAAGCAAC AGCGCTGGCC TTTGCTCAGG AAGGCGCCGA CGTCGTCGTC
GTGGATCTGT CGGAGGAAGG CGCCAAGGCG ACGGCGCGCA TGATCGAGGA GCAAGGCGTA
CGCGCACTTC CCGTGAAATG CGACGTCTCA AATCCGAAAG ACGTGCAGGC CGCTCTCGCC
GCTACGATGG ATACGTTTGG TCGGCTTGAT TTTGCGTTCA ACAATGCGGG TATTGAGCAA
GCTCTCGCCT ATACAGCCGA CATCAGCGAC GAACTGTTCG AGCGCAATCT GCGGGTCAAT
CTCGGCGGCG TCTTTTACTG CATGAAGTAT CAGATTCCGC TCATGCTCAA GAATGGCGGT
GGTTCGATCG TGAACACGTC GTCCGGCGCT GGTGTTGTTG GTATTCGTGG TCAGGGTGCC
TACTGCGCAG CAAAACATGG TGTGCTCGGC TTGACGAAGT CTGCCGCTCT TGAGTATGCG
AAGGAAGGCG TGCGCATCAA CGCTGTCTGT CCGGGCATCA TCGACACGCC TATGATTGGC
CGCTTCACGC AAGGTACGGA GGAAAATCGC AAGCGGATGA TTGCTCAGGA ACCTATCGGC
CGTCTGGGCC GGCCTGAGGA GATCGCCAAT ACTGTTCTTT GGCTGTGTTC CGACGTAGCT
GGATTTGCGA TCGGTCATGC CGTCGTGGTC GACGGTGGGC AGACAGCCGG CCTCTAA
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| Protein sequence | MTTHRKWNYE GKVAFVTGAA NGIGQATALA FAQEGADVVV VDLSEEGAKA TARMIEEQGV
RALPVKCDVS NPKDVQAALA ATMDTFGRLD FAFNNAGIEQ ALAYTADISD ELFERNLRVN
LGGVFYCMKY QIPLMLKNGG GSIVNTSSGA GVVGIRGQGA YCAAKHGVLG LTKSAALEYA
KEGVRINAVC PGIIDTPMIG RFTQGTEENR KRMIAQEPIG RLGRPEEIAN TVLWLCSDVA
GFAIGHAVVV DGGQTAGL
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