| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_0677 |
|---|
| Symbol | |
|---|
| ID | 8446263 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 745193 |
|---|
| End bp | 746005 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 645039812 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_003200081 |
|---|
| Protein GI | 258650925 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 63 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACTTC GGGACAAGGT GGCCGTGATC ACCGGTGCGT CTTCGGGTTT CGGCCGTGCC
GCGGCGCTGC TGTTCGCCGC GGAGGGGGCG TCGGTGGTGG TCGCCGACAT CATCGACAAG
CCGCTGCCCA AGGGCTTCGA GGACGATCTG GAGCACCCCA CCGACGAGCT GATCCGCAGC
AAGGGCGGGC AGGCGGTCTT CGTCCGCTGC GACGTCACCC GTAAGGCCGA CACCGACGCG
GCCGTCGCGG CCGCGGTGGA GAGCTTCGGC CGGCTGGACG TCATGTTCAA CAACGCCGGG
ATCTATCGCG GCGGCAAGCT GTTCGACGAG TTCACCGAGG AGGACCTGGA CGCCTGCTTC
AACGTCAACG CCAAGGGCAC CTTCTTCGGC ACCCAGTCCG CGGTGGTGCA GTTCCGCCGG
CAGGACCCGA ACCCGGCCAC CGGCCAGCGC GGCACCATCG TGAACCTGGT GTCCACCGCC
GGGCTGCAGG GCCACCCGCG GCAGTCGGTC TACAACATCT CCAAGGGCGC GCAGGCCAAC
CTGACCCGGT GCGCGGCCAT CGAGTACGGA CCCGAGGGCA TCCGGGTCAA CGGGATCTGC
CCCACCTACG CCAAGACGGC GCTGACCCGG GACCTGTACG AGGACATGGC CTTCATGCAG
ACCTTCGCCG ACAGTGTGCC GCTCAAGCGC TGGGGTGAGA TGGCCGACGT GGCCAACCTG
GCCCTGTACC TGGCCAGCGA CGAATCCAGC TACGTGCACG GCGATCTCGT GCGCATCGAC
GGCGGCGAGA CGCTCTGCCG GTACTCGGTC TGA
|
|---|
| Protein sequence | MRLRDKVAVI TGASSGFGRA AALLFAAEGA SVVVADIIDK PLPKGFEDDL EHPTDELIRS
KGGQAVFVRC DVTRKADTDA AVAAAVESFG RLDVMFNNAG IYRGGKLFDE FTEEDLDACF
NVNAKGTFFG TQSAVVQFRR QDPNPATGQR GTIVNLVSTA GLQGHPRQSV YNISKGAQAN
LTRCAAIEYG PEGIRVNGIC PTYAKTALTR DLYEDMAFMQ TFADSVPLKR WGEMADVANL
ALYLASDESS YVHGDLVRID GGETLCRYSV
|
|---|
| |