| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1352 |
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| Symbol | |
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| ID | 5832797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 1501765 |
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| End bp | 1502613 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641367145 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001638824 |
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| Protein GI | 163850781 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.316546 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.241504 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTCTG CTCATCGTTC CATTGAGGGA CACACGCCTG ATCGGCGGCT CGCCCGATGT
CTACGTCAGG CTCCTCAGAA ACATCAGCTG AGAGATCGAG ACATGGGCCG TTTCAACGGG
AAGGTCGCAT TCATCACGGG CGCGGCCAGC GGCATCGGCC GCGCCGCCGC CATCGCGTTC
GCGAGGGAGG GGGCACAGGT CGCGATCACG GACCGCACGG AGGAGGCTCT GGAACGCCTC
CGCGCCGAGA TCGAGGGGAA TGGCGGCGCG GTGATCGCGA TCCGGTGCGA TGTGTCGTTG
CCGGAGGACG TCGCGGCTGC GGTCGCCCGG ACCGTCGAAC GGTTCGGCCG CCTTGACTGC
GCCTTCAACA ACGCGGGCGT CGAGAACAAG GCTGCCCCCG TCCACGAGAT CGCCCTGGAC
GAATGGGACC GGATCCTCGA CATCAACCTG CGCGGCACGT TCGTGTGCAT GAAGCACGAG
ATCGCGCAGA TGCTGCGCCA AGGCGGTGGC GTGGTGGTCA ACACCTCCTC CGGCGCGGGC
ATCAGAGGCG TGGCGGGAGG GGCGAGCTAC GCTGCCTCGA AGCACGCCCT GATCGGCCTC
ACCAAATCGG CCGCCCTCGA CTACGCGAAG GCGAACATCC GGGTGAACGC GGTTTTGCCC
GGGAACATCG AGACGCCGAT GATGGAGCGC TTCACGGGCG GCGACATCCA GAAGGCGATC
GACCTTGAGC CGGTCGGGCG CCTGGGTAAG CCCGAGGAGA TCGCCGAGGC GGTCCTCTGG
ATGTGTTCGG ATCTCGGTGC CTTCGTGACC GGCGCGTCGA TTTCGGTCGA TGGCGGCTGG
TCGCTCTGA
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| Protein sequence | MNSAHRSIEG HTPDRRLARC LRQAPQKHQL RDRDMGRFNG KVAFITGAAS GIGRAAAIAF
AREGAQVAIT DRTEEALERL RAEIEGNGGA VIAIRCDVSL PEDVAAAVAR TVERFGRLDC
AFNNAGVENK AAPVHEIALD EWDRILDINL RGTFVCMKHE IAQMLRQGGG VVVNTSSGAG
IRGVAGGASY AASKHALIGL TKSAALDYAK ANIRVNAVLP GNIETPMMER FTGGDIQKAI
DLEPVGRLGK PEEIAEAVLW MCSDLGAFVT GASISVDGGW SL
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